RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NCANO14594 1321 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KIF13BQ9NQT8 1826 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZMYM2Q9UBW7 1377 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TECPR2O15040 1411 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 WNK3Q9BYP7 1800 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 EIF4E1BA6NMX2 242 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 RASA4BC9J798 803 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 M0QX08 132 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 KIAA0391O15091 583 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 RASA4O43374 803 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 EXOC3O60645 756 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 DTNBO60941 627 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT36O76013 467 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TM7SF2O76062 418 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 CAMTA2O94983 1202 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC4O95801 387 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 FGAP02671 866 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 FGGP02679 453 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM58BPP0C7Q3 252 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 GSTT2P0CG29 244 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 GSTT2BP0CG30 244 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MYBL1P10243 752 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SMPD1P17405 629 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 VCLP18206 1134 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT15P19012 456 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TAC1P20366 129 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 M6PRP20645 277 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 KLRC1P26715 233 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TKTP29401 623 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 GTF2H1P32780 548 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 S100A5P33763 92 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 CA8P35219 290 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SERPINB6P35237 376 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 PRKCIP41743 596 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 EIF2B2P49770 351 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ARFIP2P53365 341 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 HADHBP55084 474 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 NAA20P61599 178 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ASIC1P78348 528 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 FKBP3Q00688 224 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TFAP4Q01664 338 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 PDE4DQ08499 809 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 DMPKQ09013 629 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 STK4Q13043 487 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MSLNQ13421 630 aaPredicted RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 THOC5Q13769 683 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 RRP1BQ14684 758 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 NR1D2Q14995 579 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 USP41Q3LFD5 358 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 RABL6Q3YEC7 729 aaPredicted RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ACSBG2Q5FVE4 666 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MIIPQ5JXC2 388 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM83BQ5T0W9 1011 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ATAD3BQ5T9A4 648 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 CENPPQ6IPU0 288 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 C11orf63Q6NUN7 778 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MAEAQ7L5Y9 396 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT28Q7Z3Y7 464 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 RIC3Q7Z5B4 369 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ANKLE2Q86XL3 938 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF354CQ86Y25 554 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SMYD4Q8IYR2 804 aaPredicted RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 LSMEM2Q8N112 164 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 CCDC82Q8N4S0 544 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 LRRC57Q8N9N7 239 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC17A8Q8NDX2 589 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TPCN2Q8NHX9 752 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SNIP1Q8TAD8 396 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC8Q8TAM2 541 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 AFG1LQ8WV93 481 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 C7orf43Q8WVR3 580 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 RFFLQ8WZ73 363 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 BAP1Q92560 729 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF75CPQ92670 426 aaPredicted RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 ART4Q93070 314 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 PHKBQ93100 1093 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 NUDT16Q96DE0 195 aaKnown RBP5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MTBPQ96DY7 904 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SUCLG2Q96I99 432 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MRGPRX2Q96LB1 330 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM161BQ96MY7 647 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC1Q99614 292 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 C7orf25Q9BPX7 421 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 HINFPQ9BQA5 517 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 BEGAINQ9BUH8 593 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 PHF20Q9BVI0 1012 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MXD3Q9BW11 206 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 AP1M1Q9BXS5 423 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 KLC2Q9H0B6 622 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TPK1Q9H3S4 243 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 USP29Q9HBJ7 922 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 POLD4Q9HCU8 107 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SH3GLB2Q9NR46 395 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 MRGBPQ9NV56 204 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 KBTBD4Q9NVX7 518 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 FKBP14Q9NWM8 211 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 CLIC5Q9NZA1 410 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 SELENONQ9NZV5 590 aa5.91□□□□□ -1.46
VTI1BP4-201ENST00000427516 TMEM9Q9P0T7 183 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms