RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 PIK3R5Q8WYR1 880 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 TSC2P49815 1807 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 IKBKBO14920 756 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 CNPP09543 421 aaKnown RBP23.36■■□□□ 1.33
SEC22C-207ENST00000423701 MCCD1P59942 119 aaPredicted RBP23.36■■□□□ 1.33
SEC22C-207ENST00000423701 DUSP6Q16828 381 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 SV2CQ496J9 727 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 DSTYKQ6XUX3 929 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 FILIP1Q7Z7B0 1213 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 LNX1Q8TBB1 728 aaPredicted RBP23.36■■□□□ 1.33
SEC22C-207ENST00000423701 RXFP1Q9HBX9 757 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 PCDHB8Q9UN66 801 aa23.36■■□□□ 1.33
SEC22C-207ENST00000423701 C4BPAP04003 597 aaKnown RBP23.35■■□□□ 1.33
SEC22C-207ENST00000423701 ERCC5P28715 1186 aaPredicted RBP23.35■■□□□ 1.33
SEC22C-207ENST00000423701 BIRC3Q13489 604 aa23.35■■□□□ 1.33
SEC22C-207ENST00000423701 PSMD5Q16401 504 aa23.35■■□□□ 1.33
SEC22C-207ENST00000423701 SENP8Q96LD8 212 aa23.35■■□□□ 1.33
SEC22C-207ENST00000423701 CDCA3Q99618 268 aaPredicted RBP23.35■■□□□ 1.33
SEC22C-207ENST00000423701 EMILIN2Q9BXX0 1053 aa23.35■■□□□ 1.33
SEC22C-207ENST00000423701 IGFLR1Q9H665 355 aa23.35■■□□□ 1.33
SEC22C-207ENST00000423701 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.35■■□□□ 1.33
SEC22C-207ENST00000423701 ARMCX3Q9UH62 379 aaPredicted RBP23.35■■□□□ 1.33
SEC22C-207ENST00000423701 R3HCC1Q9Y3T6 440 aaKnown RBP23.35■■□□□ 1.33
SEC22C-207ENST00000423701 PRUNE2Q8WUY3 3088 aa23.35■■□□□ 1.33
SEC22C-207ENST00000423701 KPNA7A9QM74 516 aa23.34■■□□□ 1.33
SEC22C-207ENST00000423701 TEX28O15482 410 aa23.34■■□□□ 1.33
SEC22C-207ENST00000423701 CST3P01034 146 aaPredicted RBP23.34■■□□□ 1.33
SEC22C-207ENST00000423701 PPP3CAQ08209 521 aa23.34■■□□□ 1.33
SEC22C-207ENST00000423701 SKIV2LQ15477 1246 aaKnown RBP23.34■■□□□ 1.33
SEC22C-207ENST00000423701 ZACNQ401N2 412 aa23.34■■□□□ 1.33
SEC22C-207ENST00000423701 VARS2Q5ST30 1063 aaKnown RBP23.34■■□□□ 1.33
SEC22C-207ENST00000423701 PDXDC1Q6P996 788 aa23.34■■□□□ 1.33
SEC22C-207ENST00000423701 KLHL5Q96PQ7 755 aa23.34■■□□□ 1.33
SEC22C-207ENST00000423701 SRRTQ9BXP5 876 aaKnown RBP23.34■■□□□ 1.33
SEC22C-207ENST00000423701 CLASP2O75122 1294 aaKnown RBP23.33■■□□□ 1.33
SEC22C-207ENST00000423701 PHACTR2O75167 634 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 ODC1P11926 461 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 RPL17P18621 184 aaKnown RBP23.33■■□□□ 1.33
SEC22C-207ENST00000423701 GCLMP48507 274 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 CREMQ03060 361 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 COL19A1Q14993 1142 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 STX1AQ16623 288 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 CCDC40Q4G0X9 1142 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 DCAF17Q5H9S7 520 aaPredicted RBP23.33■■□□□ 1.33
SEC22C-207ENST00000423701 C15orf39Q6ZRI6 1047 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 ANKS3Q6ZW76 656 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 SV2AQ7L0J3 742 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 APPL2Q8NEU8 664 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 HPDLQ96IR7 371 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 METTL14Q9HCE5 456 aaKnown RBP23.33■■□□□ 1.33
SEC22C-207ENST00000423701 ANO10Q9NW15 660 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 FNIP2Q9P278 1114 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 MTRRQ9UBK8 725 aa23.33■■□□□ 1.33
SEC22C-207ENST00000423701 TIMM13Q9Y5L4 95 aaPredicted RBP23.33■■□□□ 1.33
SEC22C-207ENST00000423701 LINC01565O15544 149 aa23.32■■□□□ 1.32
SEC22C-207ENST00000423701 MYO1EQ12965 1108 aa23.32■■□□□ 1.32
SEC22C-207ENST00000423701 CT47A1Q5JQC4 288 aaPredicted RBP23.32■■□□□ 1.32
SEC22C-207ENST00000423701 FRMD5Q7Z6J6 570 aa23.32■■□□□ 1.32
SEC22C-207ENST00000423701 EFHBQ8N7U6 833 aa23.32■■□□□ 1.32
SEC22C-207ENST00000423701 VN1R2Q8NFZ6 395 aa23.32■■□□□ 1.32
SEC22C-207ENST00000423701 MMRN2Q9H8L6 949 aa23.32■■□□□ 1.32
SEC22C-207ENST00000423701 CYB561D2O14569 222 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 VNN1O95497 513 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 FGFR1OPO95684 399 aaKnown RBP23.31■■□□□ 1.32
SEC22C-207ENST00000423701 ADH1AP07327 375 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 TYMPP19971 482 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 NDUFV1P49821 464 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 MYL6P60660 151 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 RBM10P98175 930 aaKnown RBP23.31■■□□□ 1.32
SEC22C-207ENST00000423701 YWHAHQ04917 246 aaPredicted RBP23.31■■□□□ 1.32
SEC22C-207ENST00000423701 TYRO3Q06418 890 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 TRPC3Q13507 836 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 NCOA4Q13772 614 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 KCNC3Q14003 757 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 MRPL58Q14197 206 aaKnown RBP23.31■■□□□ 1.32
SEC22C-207ENST00000423701 NFKBIBQ15653 356 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 CTC1Q2NKJ3 1217 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 SKOR2Q2VWA4 1001 aaPredicted RBP23.31■■□□□ 1.32
SEC22C-207ENST00000423701 TCERG1LQ5VWI1 586 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 C11orf57Q6ZUT1 292 aaPredicted RBP23.31■■□□□ 1.32
SEC22C-207ENST00000423701 GLYCTKQ8IVS8 523 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 SLC35C1Q96A29 364 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 PABPC5Q96DU9 382 aaKnown RBP23.31■■□□□ 1.32
SEC22C-207ENST00000423701 CLSTN3Q9BQT9 956 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 XYLT2Q9H1B5 865 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 TMEM8AQ9HCN3 771 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 GDAP2Q9NXN4 497 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 BACE2Q9Y5Z0 518 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 HCFC2Q9Y5Z7 792 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 XIRP2A4UGR9 3374 aa23.31■■□□□ 1.32
SEC22C-207ENST00000423701 ARHGEF37A1IGU5 675 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 FSD2A1L4K1 749 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 NCK2O43639 380 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 GNA14O95837 355 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 GLP2RO95838 553 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 KLRC2P26717 231 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 GTF2H1P32780 548 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 RSPO2Q6UXX9 243 aaPredicted RBP23.3■■□□□ 1.32
SEC22C-207ENST00000423701 CLDND1Q9NY35 253 aa23.3■■□□□ 1.32
SEC22C-207ENST00000423701 SNX9Q9Y5X1 595 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms