RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 CD101Q93033 1021 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 FAM167AQ96KS9 214 aa11.65□□□□□ -0.55
DDX56-203ENST00000421223 MTRF1LQ9UGC7 380 aaKnown RBP11.65□□□□□ -0.55
DDX56-203ENST00000421223 R3HDM2Q9Y2K5 976 aaKnown RBP11.65□□□□□ -0.55
DDX56-203ENST00000421223 RLFQ13129 1914 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 SHOX2O60902 331 aaPredicted RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 ACSL3O95573 720 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 SLC25A27O95847 323 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 INSRRP14616 1297 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 TCF4P15884 667 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 ADCY8P40145 1251 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 PTGIRP43119 386 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 HADHBP55084 474 aaKnown RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 LACTBP83111 547 aaPredicted RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 PLCB3Q01970 1234 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 KRT17Q04695 432 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 MTMR3Q13615 1198 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 FAM182AQ5T1J6 154 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 MAP1SQ66K74 1059 aaPredicted RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 DENND2CQ68D51 928 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 GPAT2Q6NUI2 795 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 BRSK2Q8IWQ3 736 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 MDM1Q8TC05 714 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 TCP11Q8WWU5 503 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 MCEEQ96PE7 176 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 SELENOSQ9BQE4 189 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 SYNCQ9H7C4 482 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 TMBIM4Q9HC24 238 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 LOXHD1Q8IVV2 1947 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 A0A087WZ62 844 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 FAM187AA6NFU0 413 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 E7EVH7 732 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 CXCL11O14625 94 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 PSMC4P43686 418 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 NOMO3P69849 1222 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 MAMLD1Q13495 774 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 TTLL4Q14679 1199 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 PPP2R5EQ16537 467 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 HP1BP3Q5SSJ5 553 aaPredicted RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 SRLQ86TD4 932 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 FGD4Q96M96 766 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 FDXACB1Q9BRP7 624 aaPredicted RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 TMEM134Q9H6X4 195 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 FEZ2Q9UHY8 353 aaPredicted RBP11.64□□□□□ -0.55
DDX56-203ENST00000421223 STYXL1Q9Y6J8 313 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 ATP8B3O60423 1300 aa11.64□□□□□ -0.55
DDX56-203ENST00000421223 EIF3HO15372 352 aaKnown RBP eCLIP11.63□□□□□ -0.553e-6■□□□□ 11.2
DDX56-203ENST00000421223 CAND2O75155 1236 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 PPFIA4O75335 1185 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 TNNC2P02585 160 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 TBXAS1P24557 533 aaPredicted RBP11.63□□□□□ -0.55
DDX56-203ENST00000421223 ABCD1P33897 745 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 ADCYAP1R1P41586 468 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 DYNLT1P63172 113 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 CCDC38Q502W7 563 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 RUFY4Q6ZNE9 571 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 ARMCX2Q7L311 632 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 ARMC9Q7Z3E5 817 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.63□□□□□ -0.55
DDX56-203ENST00000421223 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 RRP15Q9Y3B9 282 aaKnown RBP11.63□□□□□ -0.55
DDX56-203ENST00000421223 PASKQ96RG2 1323 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 HMGB1P1B2RPK0 211 aaPredicted RBP11.63□□□□□ -0.55
DDX56-203ENST00000421223 IQCF3P0C7M6 154 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 HSPA6P17066 643 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 MON1BQ7L1V2 547 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 FASTKD5Q7L8L6 764 aaKnown RBP11.63□□□□□ -0.55
DDX56-203ENST00000421223 EFCAB13Q8IY85 973 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 SYT17Q9BSW7 474 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 RPF1Q9H9Y2 349 aaKnown RBP11.63□□□□□ -0.55
DDX56-203ENST00000421223 IVNS1ABPQ9Y6Y0 642 aa11.63□□□□□ -0.55
DDX56-203ENST00000421223 ZBTB42B2RXF5 422 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 F8VP50 259 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 EBAG9O00559 213 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 PODXLO00592 558 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 CTNNA2P26232 953 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 GJA5P36382 358 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 CENPCQ03188 943 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ADCY1Q08828 1119 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 DNAJC24Q6P3W2 148 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ZDHHC24Q6UX98 284 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ZPBP2Q6X784 338 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 DPP9Q86TI2 863 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 TFAP2BQ92481 460 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ANKRD36BP1Q96IX9 119 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 FAM49AQ9H0Q0 323 aaPredicted RBP11.62□□□□□ -0.55
DDX56-203ENST00000421223 MRPL47Q9HD33 250 aaKnown RBP11.62□□□□□ -0.55
DDX56-203ENST00000421223 ZDHHC18Q9NUE0 388 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 GRHL1Q9NZI5 618 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 TJP2Q9UDY2 1190 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 ADGRA2Q96PE1 1338 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 H0YGN5 161 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 MYO1CO00159 1063 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 MTA2O94776 668 aa11.62□□□□□ -0.55
DDX56-203ENST00000421223 PROSCO94903 275 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms