RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
LINC00642-201ENST00000419459 TOX2Q96NM4 488 aa13.8□□□□□ -0.2
LINC00642-201ENST00000419459 OSBPL9Q96SU4 736 aa13.8□□□□□ -0.2
LINC00642-201ENST00000419459 POP1Q99575 1024 aaKnown RBP13.8□□□□□ -0.2
LINC00642-201ENST00000419459 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
LINC00642-201ENST00000419459 CXCL16Q9H2A7 254 aa13.8□□□□□ -0.2
LINC00642-201ENST00000419459 NXF3Q9H4D5 531 aaKnown RBP13.8□□□□□ -0.2
LINC00642-201ENST00000419459 ACTR5Q9H9F9 607 aaPredicted RBP13.8□□□□□ -0.2
LINC00642-201ENST00000419459 TMEM39AQ9NV64 488 aa13.8□□□□□ -0.2
LINC00642-201ENST00000419459 HMGB1P1B2RPK0 211 aaPredicted RBP13.79□□□□□ -0.2
LINC00642-201ENST00000419459 PSMC2P35998 433 aaKnown RBP13.79□□□□□ -0.2
LINC00642-201ENST00000419459 BFSP2Q13515 415 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 NFIL3Q16649 462 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 LMBRD2Q68DH5 695 aaPredicted RBP13.79□□□□□ -0.2
LINC00642-201ENST00000419459 C8orf74Q6P047 294 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 TAX1BP1Q86VP1 789 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 IQCKQ8N0W5 287 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 ARFGAP2Q8N6H7 521 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 EIF1ADQ8N9N8 165 aaKnown RBP13.79□□□□□ -0.2
LINC00642-201ENST00000419459 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 APOL6Q9BWW8 343 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 CHD7Q9P2D1 2997 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 ARMCX3Q9UH62 379 aaPredicted RBP13.79□□□□□ -0.2
LINC00642-201ENST00000419459 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
LINC00642-201ENST00000419459 MACROD2A1Z1Q3 448 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 TRIM43BA6NCK2 446 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 CCDC85CA6NKD9 419 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 RPLP2P05387 115 aaKnown RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 CXCL8P10145 99 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 DLATP10515 647 aaKnown RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 ACTN3Q08043 901 aaPredicted RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 PDCLQ13371 301 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 FAM26DQ5JW98 314 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 MIIPQ5JXC2 388 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 CFAP58Q5T655 872 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 NAA35Q5VZE5 725 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 SLFN12LQ6IEE8 588 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 SLC27A1Q6PCB7 646 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 TMEM130Q8N3G9 435 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 BORCS6Q96GS4 357 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 FBXL18Q96ME1 805 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 GDF3Q9NR23 364 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 PLAGL2Q9UPG8 496 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 GPR182O15218 404 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 PJA2O43164 708 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 EXTL3O43909 919 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 FGFR1OPO95684 399 aaKnown RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 AKAP5P24588 427 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 BFSP1Q12934 665 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 PREPLQ4J6C6 727 aaPredicted RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 TRIM59Q8IWR1 403 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 RNF10Q8N5U6 811 aaKnown RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 TSEN2Q8NCE0 465 aaKnown RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 GIMAP7Q8NHV1 300 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 WHAMMQ8TF30 809 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 ZIM3Q96PE6 472 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 ADPGKQ9BRR6 497 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 ERVK-5Q9HDB9 667 aa13.78□□□□□ -0.2
LINC00642-201ENST00000419459 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
LINC00642-201ENST00000419459 PTPRJQ12913 1337 aa13.77□□□□□ -0.2
LINC00642-201ENST00000419459 SZT2Q5T011 3432 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 GOLGA6L7A0A1B0GV03 622 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 OGTO15294 1046 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 CAND2O75155 1236 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 FAM107AO95990 144 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 NR1D1P20393 614 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 SNRPFP62306 86 aaKnown RBP13.77□□□□□ -0.21
LINC00642-201ENST00000419459 TCTN1Q2MV58 587 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 UBXN11Q5T124 520 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 DBF4BQ8NFT6 615 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 ZNF473Q8WTR7 871 aaKnown RBP13.77□□□□□ -0.21
LINC00642-201ENST00000419459 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 SLC35C1Q96A29 364 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 SNTG2Q9NY99 539 aa13.77□□□□□ -0.21
LINC00642-201ENST00000419459 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC00642-201ENST00000419459 ZNF233A6NK53 670 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
LINC00642-201ENST00000419459 RASSF9O75901 435 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 STAG3L1P0CL83 205 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 CYP24A1Q07973 514 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
LINC00642-201ENST00000419459 CFAP221Q4G0U5 840 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 FKBP15Q5T1M5 1219 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 WLSQ5T9L3 541 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 P3H4Q92791 437 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 LPPQ93052 612 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 ADAM2Q99965 735 aa13.76□□□□□ -0.21
LINC00642-201ENST00000419459 KLC4Q9NSK0 619 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms