RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 CETN2P41208 172 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 PHKA1P46020 1223 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 C21orf58P58505 322 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 GUCY1B3Q02153 619 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 KLHL30Q0D2K2 578 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 SMAD4Q13485 552 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 COG2Q14746 738 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 CRYMQ14894 314 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 NOLC1Q14978 699 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TCEA2Q15560 299 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 MAP3K11Q16584 847 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ATP13A4Q4VNC1 1196 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 SMUG1Q53HV7 270 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 HP1BP3Q5SSJ5 553 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ZBTB41Q5SVQ8 909 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 XRRA1Q6P2D8 792 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 LDHAL6AQ6ZMR3 332 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ZNF574Q6ZN55 896 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 USP51Q70EK9 711 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ENOSF1Q7L5Y1 443 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 GALNTL5Q7Z4T8 443 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 SLC9B2Q86UD5 537 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 WFDC3Q8IUB2 231 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 EPHX4Q8IUS5 362 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 FAM186BQ8IYM0 893 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TDHQ8IZJ6 230 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TTC5Q8N0Z6 440 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TXLNBQ8N3L3 684 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 MAGEB6Q8N7X4 407 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 IPMKQ8NFU5 416 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 CPLX3Q8WVH0 158 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 TMEM40Q8WWA1 233 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 FAM168AQ92567 244 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 EXOC4Q96A65 974 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 GPRASP2Q96D09 838 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 DTNBP1Q96EV8 351 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 WNK4Q96J92 1243 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 RUNDC3BQ96NL0 473 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 CATSPER2Q96P56 530 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 SEC62Q99442 399 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 SLC38A3Q99624 504 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 CDX2Q99626 313 aaPredicted RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 OSMRQ99650 979 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ADPGKQ9BRR6 497 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 YIPF4Q9BSR8 244 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 SARGQ9BW04 601 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 NCOR1P1Q9H4R4 102 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 BICC1Q9H694 974 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 NCOA5Q9HCD5 579 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 RASSF1Q9NS23 344 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 DDX18Q9NVP1 670 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 IL1RAPL1Q9NZN1 696 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 GTF2IRD1Q9UHL9 959 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 MOSPD1Q9UJG1 213 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 PAIP2BQ9ULR5 123 aaKnown RBP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 FZD1Q9UP38 647 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ACTL7BQ9Y614 415 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC01048-201ENST00000414480 SCN9AQ15858 1988 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 ALPK3Q96L96 1907 aa4.25□□□□□ -1.73
LINC01048-201ENST00000414480 COL3A1P02461 1466 aaPredicted RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 NCOR1O75376 2440 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 ZSWIM8A7E2V4 1837 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 C9IYK1 514 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 UBXN8O00124 270 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 ABLIM1O14639 778 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 SGSM2O43147 1006 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 ECE2O60344 883 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 RTN2O75298 545 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 ATP6V1G1O75348 118 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 URI1O94763 535 aaPredicted RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 APBB3O95704 486 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 CPP00450 1065 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 NPPAP01160 153 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 CD4P01730 458 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 NFICP08651 508 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 TROVE2P10155 538 aaKnown RBP eCLIP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 ESRRAP11474 423 aaPredicted RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 PCNAP12004 261 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 P4HA1P13674 534 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 EDN3P14138 238 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 ARF4P18085 180 aaPredicted RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 XPAP23025 273 aaPredicted RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 SFPQP23246 707 aaKnown RBP eCLIP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 MCM3P25205 808 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 PRKAR1BP31321 381 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 SOX5P35711 763 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 TCF7P36402 384 aaPredicted RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 ETFBP38117 255 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 HNF4AP41235 474 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 MAGEA10P43363 369 aaPredicted RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 RXRGP48443 463 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 CCT8P50990 548 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 GTF2A2P52657 109 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 OLR1P78380 273 aa4.24□□□□□ -1.73
LINC01048-201ENST00000414480 MRPS15P82914 257 aaKnown RBP4.24□□□□□ -1.73
LINC01048-201ENST00000414480 CD83Q01151 205 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms