RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.52■□□□□ 0.4
HCG18-233ENST00000412685 TRAPPC12Q8WVT3 735 aa17.52■□□□□ 0.4
HCG18-233ENST00000412685 MAIP1Q8WWC4 291 aa17.52■□□□□ 0.4
HCG18-233ENST00000412685 RNF25Q96BH1 459 aaPredicted RBP17.52■□□□□ 0.4
HCG18-233ENST00000412685 O00370 1275 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 PSTPIP1O43586 416 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 SNX1Q13596 522 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 WDR78Q5VTH9 848 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 ATG4AQ8WYN0 398 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 COPS5Q92905 334 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 NIF3L1Q9GZT8 377 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 CHST7Q9NS84 486 aa17.52■□□□□ 0.39
HCG18-233ENST00000412685 MCM3APO60318 1980 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 DCDC2CA8MYV0 355 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 NDUFAB1O14561 156 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 CD58P19256 250 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 KRT17Q04695 432 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 SURF1Q15526 300 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 HOOK3Q86VS8 718 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 RHOT1Q8IXI2 618 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 ZNF668Q96K58 619 aaPredicted RBP17.51■□□□□ 0.39
HCG18-233ENST00000412685 NLRP4Q96MN2 994 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 JPH2Q9BR39 696 aaPredicted RBP17.51■□□□□ 0.39
HCG18-233ENST00000412685 FAM129AQ9BZQ8 928 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 EPN3Q9H201 632 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 PARVAQ9NVD7 372 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 SLC12A6Q9UHW9 1150 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 EBAG9O00559 213 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
HCG18-233ENST00000412685 GJB1P08034 283 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 PROZP22891 400 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 MMP8P22894 467 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 SLC26A2P50443 739 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 TAS2R40P59535 323 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 MAGOHP61326 146 aaKnown RBP17.51■□□□□ 0.39
HCG18-233ENST00000412685 TFAMQ00059 246 aaKnown RBP17.51■□□□□ 0.39
HCG18-233ENST00000412685 CALCOCO2Q13137 446 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 PTGISQ16647 500 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 SGSM1Q2NKQ1 1148 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 TMEM63BQ5T3F8 832 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 MPZL3Q6UWV2 235 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 TSHZ1Q6ZSZ6 1077 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 CCDC50Q8IVM0 306 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 OPTNQ96CV9 577 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 CISHQ9NSE2 258 aa17.51■□□□□ 0.39
HCG18-233ENST00000412685 MYO1CO00159 1063 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 ACKR2O00590 384 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 GJB6O95452 261 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 HOXC6P09630 235 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 TXNP10599 105 aaKnown RBP17.5■□□□□ 0.39
HCG18-233ENST00000412685 RALAP11233 206 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 OSBPP22059 807 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 PPP2R2AP63151 447 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 TRPC3Q13507 836 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 SLC29A2Q14542 456 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 ATF7IP2Q5U623 682 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 SMARCAD1Q9H4L7 1026 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 PTPRHQ9HD43 1115 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 INO80B-WBP1J3KQ70 363 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 MAN1A1P33908 653 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 TFDP1Q14186 410 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 SLMAPQ14BN4 828 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 ZNF568Q3ZCX4 644 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 FASTKD5Q7L8L6 764 aaKnown RBP17.5■□□□□ 0.39
HCG18-233ENST00000412685 THNSL1Q8IYQ7 743 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 KATNAL2Q8IYT4 538 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 FEZF2Q8TBJ5 459 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 HEMGNQ9BXL5 484 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 INO80BQ9C086 356 aaPredicted RBP17.5■□□□□ 0.39
HCG18-233ENST00000412685 DCLK3Q9C098 648 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 FZD8Q9H461 694 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 MROH8Q9H579 483 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 USTQ9Y2C2 406 aa17.5■□□□□ 0.39
HCG18-233ENST00000412685 B4GALT5O43286 388 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 CAND2O75155 1236 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 CLCN3P51790 818 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 KLF1Q13351 362 aaPredicted RBP17.49■□□□□ 0.39
HCG18-233ENST00000412685 ZNF394Q53GI3 561 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 TLCD1Q96CP7 247 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 ZBTB10Q96DT7 871 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 PDGFCQ9NRA1 345 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 WHRNQ9P202 907 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 ASIC3Q9UHC3 531 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 R3HDM2Q9Y2K5 976 aaKnown RBP17.49■□□□□ 0.39
HCG18-233ENST00000412685 TP73O15350 636 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 HBP1O60381 514 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 LSM8O95777 96 aaKnown RBP17.49■□□□□ 0.39
HCG18-233ENST00000412685 TMEM191BP0C7N4 346 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 RARGP13631 454 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 FGFR4P22455 802 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 BRD2P25440 801 aaKnown RBP17.49■□□□□ 0.39
HCG18-233ENST00000412685 SSR1P43307 286 aaKnown RBP17.49■□□□□ 0.39
HCG18-233ENST00000412685 OSTNP61366 133 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 RPL7AP62424 266 aaKnown RBP17.49■□□□□ 0.39
HCG18-233ENST00000412685 PDE4CQ08493 712 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 GPAT2Q6NUI2 795 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 EFCAB12Q6NXP0 572 aa17.49■□□□□ 0.39
HCG18-233ENST00000412685 SYDE1Q6ZW31 735 aaPredicted RBP17.49■□□□□ 0.39
HCG18-233ENST00000412685 WEE2P0C1S8 567 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms