RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 KLK14Q9P0G3 267 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 NXF1Q9UBU9 619 aaKnown RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 TRIM10Q9UDY6 481 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 NOCTQ9UK39 431 aaKnown RBP12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 INTUQ9ULD6 942 aa12.44□□□□□ -0.42
SNRNP35-202ENST00000412157 KCNE1P15382 129 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 ACO1P21399 889 aaKnown RBP12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 GNA15P30679 374 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 GUCY2FP51841 1108 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 NAP1L1P55209 391 aaKnown RBP12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 CDR2Q01850 454 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 XKR4Q5GH76 650 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 GLRA4Q5JXX5 417 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 ALKAL1Q6UXT8 129 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 SLC47A2Q86VL8 602 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 SLC35F6Q8N357 371 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 TTC39CQ8N584 583 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 SLC30A5Q8TAD4 765 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 PGBD4Q96DM1 585 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 HPDLQ96IR7 371 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 ZNF560Q96MR9 790 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 LACRTQ9GZZ8 138 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 XYLT2Q9H1B5 865 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 CYP3A43Q9HB55 503 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 POLIQ9UNA4 740 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 TFR2Q9UP52 801 aa12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.43□□□□□ -0.42
SNRNP35-202ENST00000412157 MACROD2A1Z1Q3 448 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 RCCD1A6NED2 376 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 TFRCP02786 760 aaKnown RBP12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 MMEP08473 750 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 CD58P19256 250 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 CYP3A5P20815 502 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 PNPLA4P41247 253 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 ASPAP45381 313 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 CDK7P50613 346 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 DSC3Q14574 896 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 ZBTB6Q15916 424 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 IFI16Q16666 785 aaKnown RBP12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 WDR72Q3MJ13 1102 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 TRIM72Q6ZMU5 477 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 RNF10Q8N5U6 811 aaKnown RBP12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 UBR7Q8N806 425 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 ZMAT2Q96NC0 199 aaKnown RBP12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 BCO2Q9BYV7 579 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 FAM124BQ9H5Z6 455 aaPredicted RBP12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 CISHQ9NSE2 258 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 SLC38A7Q9NVC3 462 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 TUBGCP4Q9UGJ1 667 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 NENFQ9UMX5 172 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 CNTN6Q9UQ52 1028 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 GIT1Q9Y2X7 761 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
SNRNP35-202ENST00000412157 SMIM28A0A1B0GU29 152 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 CTAGE9A4FU28 777 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 BTNL10A8MVZ5 291 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 THAP12O43422 761 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 RTN2O75298 545 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 ABL1P00519 1130 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 GZMAP12544 262 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 SELPP16109 830 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 FMO1Q01740 532 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 SCARA3Q6AZY7 606 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 PPP1R2P3Q6NXS1 205 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 MRPL10Q7Z7H8 261 aaKnown RBP12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 TRIM58Q8NG06 486 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 OLIG1Q8TAK6 271 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 CXorf38Q8TB03 319 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 C18orf25Q96B23 403 aaPredicted RBP12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 NOX5Q96PH1 765 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 WDR24Q96S15 920 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 NAPGQ99747 312 aaPredicted RBP12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 ADAM2Q99965 735 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 TRAIPQ9BWF2 469 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 PACSIN1Q9BY11 444 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 IRX2Q9BZI1 471 aaPredicted RBP12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 SMYD3Q9H7B4 428 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 NR2E3Q9Y5X4 410 aa12.41□□□□□ -0.42
SNRNP35-202ENST00000412157 NCANO14594 1321 aa12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 A0A0A6YYK5 440 aaPredicted RBP12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 MGEA5O60502 916 aa12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 PQBP1O60828 265 aaKnown RBP12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 ZNF623O75123 536 aa12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 URI1O94763 535 aaPredicted RBP12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 MOCS3O95396 460 aa12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 WEE2P0C1S8 567 aa12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 CHRNB2P17787 502 aa12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 MLH1P40692 756 aa12.4□□□□□ -0.42
SNRNP35-202ENST00000412157 NOP2P46087 812 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms