RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 HK3P52790 923 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 SLURP1P55000 103 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 HGFACQ04756 655 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 PRKG1Q13976 671 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 POSTNQ15063 836 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 TAF5Q15542 800 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 VMACQ2NL98 169 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 FKBP15Q5T1M5 1219 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 C1QTNF12Q5T7M4 302 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 AGAP9Q5VTM2 703 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 CIAPIN1Q6FI81 312 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 GADL1Q6ZQY3 521 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 CCDC33Q8N5R6 958 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 TRAPPC12Q8WVT3 735 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 CASKIN2Q8WXE0 1202 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 BRI3BPQ8WY22 251 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 MTFMTQ96DP5 389 aaKnown RBP5.25□□□□□ -1.57
BRCA1-204ENST00000412061 ZBTB10Q96DT7 871 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 FAM167AQ96KS9 214 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 RPL10LQ96L21 214 aaKnown RBP5.25□□□□□ -1.57
BRCA1-204ENST00000412061 MRGPRX4Q96LA9 322 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 SAMD11Q96NU1 681 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 DMRTA2Q96SC8 542 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 LDAHQ9H6V9 325 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 ARMT1Q9H993 441 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 RIC8AQ9NPQ8 531 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 TBC1D22BQ9NU19 505 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 NCDNQ9UBB6 729 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 CEP83Q9Y592 693 aa5.25□□□□□ -1.57
BRCA1-204ENST00000412061 A0A088AWK7 358 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 LRRC14BA6NHZ5 514 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 DBX1A6NMT0 343 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 ADCY6O43306 1168 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 SKAP2O75563 359 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-204ENST00000412061 GFPT2O94808 682 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 BAIAP3O94812 1187 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 AMY1AP04745 511 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 IL2RBP14784 551 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 RPL17P18621 184 aaKnown RBP5.24□□□□□ -1.57
BRCA1-204ENST00000412061 DDCP20711 480 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 GUCY1A2P33402 732 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 PTPN7P35236 360 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 ARL4CP56559 192 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 ADAM8P78325 824 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 APBA1Q02410 837 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 PMS2P11Q13670 270 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 ACAP1Q15027 740 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 KHDC1Q4VXA5 237 aaKnown RBP5.24□□□□□ -1.57
BRCA1-204ENST00000412061 FAM133BQ5BKY9 247 aaKnown RBP5.24□□□□□ -1.57
BRCA1-204ENST00000412061 WDR45BQ5MNZ6 344 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 PRAMEF14Q5SWL7 426 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 BORAQ6PGQ7 559 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 C4orf50Q6ZRC1 276 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 CMTM4Q8IZR5 234 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 TTC30BQ8N4P2 665 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 OR5M3Q8NGP4 307 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 PLBD2Q8NHP8 589 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 IFI44Q8TCB0 444 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 NUP133Q8WUM0 1156 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 RABGGTAQ92696 567 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 TMEM120AQ9BXJ8 343 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 ATP6V0A4Q9HBG4 840 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 LMBRD1Q9NUN5 540 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 GGA3Q9NZ52 723 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 MOCS1Q9NZB8 636 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 AJAP1Q9UKB5 411 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-204ENST00000412061 PCDHA3Q9Y5H8 950 aa5.24□□□□□ -1.57
BRCA1-204ENST00000412061 PMS2P1A4D2B8 440 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 FOXN3O00409 490 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 APOL1O14791 398 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 TEX33O43247 280 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 B4GALT4O60513 344 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 POLBP06746 335 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 THP07101 528 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 HARSP12081 509 aaKnown RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 TSHRP16473 764 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 CNTFP26441 200 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ELF1P32519 619 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 KRT9P35527 623 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 CASRP41180 1078 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 KCNC1P48547 511 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 HSPA7P48741 367 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 NPEPPSP55786 919 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 RAB1AP62820 205 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 TLE1Q04724 770 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PRKG2Q13237 762 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 SP140Q13342 867 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 MTM1Q13496 603 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ATP2B3Q16720 1220 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 NBPF8Q3BBV2 869 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 TSHZ3Q63HK5 1081 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 RFX8Q6ZV50 586 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ZNF572Q7Z3I7 529 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-204ENST00000412061 HEATR3Q7Z4Q2 680 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 PLEKHH3Q7Z736 793 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ANKRD23Q86SG2 305 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 COLGALT2Q8IYK4 626 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 CACNA2D3Q8IZS8 1091 aa5.23□□□□□ -1.57
BRCA1-204ENST00000412061 ZGPATQ8N5A5 531 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms