RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 ADAM12O43184 909 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 ATG13O75143 517 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 MICAL2O94851 1124 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 FOSP01100 380 aaPredicted RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 LRG1P02750 347 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 THBS1P07996 1170 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 FAM86B2P0C5J1 330 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 HOXB4P17483 251 aaPredicted RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 HOXA11P31270 313 aaPredicted RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 GBP1P32455 592 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 OR1D2P34982 312 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 PRKCEQ02156 737 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 PTK2Q05397 1052 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 LMAN2Q12907 356 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 SART3Q15020 963 aaKnown RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 KARSQ15046 597 aaKnown RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 ZNF423Q2M1K9 1284 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 PRSS36Q5K4E3 855 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 PKN3Q6P5Z2 889 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 PDXDC1Q6P996 788 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 RAB44Q7Z6P3 723 aaPredicted RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 KSR1Q8IVT5 923 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 TCEAL4Q96EI5 215 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 CORO1BQ9BR76 489 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 ZNF577Q9BSK1 485 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 DSCC1Q9BVC3 393 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 ANO3Q9BYT9 981 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 IFT122Q9HBG6 1241 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 SUCLA2Q9P2R7 463 aaPredicted RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 IPPQ9Y573 584 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 WDFY3Q8IZQ1 3526 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 SPAG17Q6Q759 2223 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 SALL3Q9BXA9 1300 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 IGKV6-21A0A0C4DH24 114 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 CCDC194A0A1B0GVG4 234 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 hCG_1642624A0A1W2PR95 340 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 HEPACAM2A8MVW5 462 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 ESPNB1AK53 854 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 MEN1O00255 615 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 ATXN7O15265 892 aaPredicted RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 CHADO15335 359 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 SREBF1P36956 1147 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 MAPK8P45983 427 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 GNAQP50148 359 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 SPIRE1Q08AE8 756 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 POU4F2Q12837 409 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 HSP90AA2PQ14568 343 aaPredicted RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 TARBP2Q15633 366 aaKnown RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 MTERF2Q49AM1 385 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 LCE3BQ5TA77 95 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 CYP4A22Q5TCH4 519 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 PDZD4Q76G19 769 aaPredicted RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 CYP2U1Q7Z449 544 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 HEATR3Q7Z4Q2 680 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 PIP4P1Q86T03 277 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 CMTR1Q8N1G2 835 aaKnown RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 SRBD1Q8N5C6 995 aaKnown RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 TTC8Q8TAM2 541 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 ZSCAN18Q8TBC5 510 aaPredicted RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 HASPINQ8TF76 798 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 RILPL2Q969X0 211 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 E2F7Q96AV8 911 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 CRELD1Q96HD1 420 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 ZSWIM3Q96MP5 696 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 MAP3K14Q99558 947 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 KRTAP4-12Q9BQ66 201 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 NUSAP1Q9BXS6 441 aaKnown RBP7.07□□□□□ -1.28
LINC00396-201ENST00000411690 TRPV4Q9HBA0 871 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 GIT1Q9Y2X7 761 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 HES2Q9Y543 173 aa7.07□□□□□ -1.28
LINC00396-201ENST00000411690 LOC400499M0QZD8 3231 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 IGLV3-22A0A075B6J6 115 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 UPK3BL1B0FP48 263 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 WDR64B1ANS9 1081 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 UPK3BL2E5RIL1 263 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 PLEKHA8P1O95397 391 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 SDSP20132 328 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 ELF1P32519 619 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 CCR2P41597 374 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 PDE1AP54750 535 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 FAM193AP78312 1265 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 ELAVL2Q12926 359 aaKnown RBP7.06□□□□□ -1.28
LINC00396-201ENST00000411690 GRIK3Q13003 919 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 SEMA3BQ13214 749 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 TRIM61Q5EBN2 209 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 PMS2CLQ68D20 193 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 CWC27Q6UX04 472 aaKnown RBP7.06□□□□□ -1.28
LINC00396-201ENST00000411690 CCNI2Q6ZMN8 369 aaPredicted RBP7.06□□□□□ -1.28
LINC00396-201ENST00000411690 SRGAP1Q7Z6B7 1085 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 C11orf74Q86VG3 221 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 HACE1Q8IYU2 909 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 ZNF843Q8N446 348 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 HDDC3Q8N4P3 179 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 CCDC82Q8N4S0 544 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 GSTCDQ8NEC7 633 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 HHIPQ96QV1 700 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 TMEM209Q96SK2 561 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 SH2D3AQ9BRG2 576 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 PAAF1Q9BRP4 392 aa7.06□□□□□ -1.28
LINC00396-201ENST00000411690 EIF2AQ9BY44 585 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms