RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TMEM206Q9H813 350 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 DNMT3BQ9UBC3 853 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 KCNH3Q9ULD8 1083 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 PCDHA7Q9UN72 937 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 ANK1P16157 1881 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 ANHXE9PGG2 379 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 IL18RAPO95256 599 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 LDHAP00338 332 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 TYMPP19971 482 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 ME1P48163 572 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 STXBP4Q6ZWJ1 553 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 USP37Q86T82 979 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 NT5DC4Q86YG4 428 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 CYP4F11Q9HBI6 524 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 HCFC1R1Q9NWW0 138 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 AFF4Q9UHB7 1163 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 RCOR1Q9UKL0 485 aa21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 TIMM13Q9Y5L4 95 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-209ENST00000409543 SEC24AO95486 1093 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 LRG1P02750 347 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 AVPR2P30518 371 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 DNM1Q05193 864 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 HTR4Q13639 388 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 PABPC1LQ4VXU2 614 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 IER5LQ5T953 404 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 ITFG1Q8TB96 612 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 FGF13Q92913 245 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 SENP8Q96LD8 212 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 PRRX2Q99811 253 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 FAM213AQ9BRX8 229 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 MAGEF1Q9HAY2 307 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 AVENQ9NQS1 362 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 DPP3Q9NY33 737 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 FAM13BQ9NYF5 915 aa21.24■□□□□ 0.99
TSPAN4-209ENST00000409543 NOTCH4Q99466 2003 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 OR6C75A6NL08 312 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 SPTLC1O15269 473 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 POLR2DO15514 142 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 PRPF6O94906 941 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 ODC1P11926 461 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 CPB1P15086 417 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 PTPN2P17706 415 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 VCPP55072 806 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 ADCY1Q08828 1119 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 RESP18Q5W5W9 173 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 C7orf25Q9BPX7 421 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 INSL5Q9Y5Q6 135 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 KMT2EQ8IZD2 1858 aa21.23■□□□□ 0.99
TSPAN4-209ENST00000409543 NARSO43776 548 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 RHOP08100 348 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 ASIC1P78348 528 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 OVOS1Q6IE37 1185 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 RNF19BQ6ZMZ0 732 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 BRSK2Q8IWQ3 736 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 EFCAB13Q8IY85 973 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 HPS3Q969F9 1004 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 SAAL1Q96ER3 474 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 CBWD1Q9BRT8 395 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 NUMBLQ9Y6R0 609 aa21.22■□□□□ 0.99
TSPAN4-209ENST00000409543 KIAA0391O15091 583 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 EXTL3O43909 919 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 CYP11A1P05108 521 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 SRFP11831 508 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 GPR17Q13304 367 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 MYBPC2Q14324 1141 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 GLIS3Q8NEA6 775 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 ZSWIM2Q8NEG5 633 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 PYM1Q9BRP8 204 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 MFSD1Q9H3U5 465 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 RBAKQ9NYW8 714 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 WNT16Q9UBV4 365 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 FBXL21Q9UKT6 434 aa21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 MRPS23Q9Y3D9 190 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-209ENST00000409543 WDFY4Q6ZS81 3184 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 EIF3DO15371 548 aaKnown RBP eCLIP21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 TAF6P49848 677 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 NUBP1P53384 320 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 WNT7BP56706 349 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 ARMCX5Q6P1M9 558 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 PARM1Q6UWI2 310 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 MTSS1LQ765P7 747 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 NPAS3Q8IXF0 933 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 PRSS33Q8NF86 280 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 FGF14Q92915 247 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 PCIF1Q9H4Z3 704 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 DSEQ9UL01 958 aa21.2■□□□□ 0.98
TSPAN4-209ENST00000409543 SCN1AP35498 2009 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 GOLGA8IPA6NC78 632 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 GOLGA8JA6NMD2 632 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 CFHP08603 1231 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 OR4Q2P0C623 313 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 HOXD13P35453 343 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 CLCN5P51795 746 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 TWF1Q12792 350 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 SLC5A9Q2M3M2 681 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 FAM26FQ5R3K3 315 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 ASTLQ6HA08 431 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 UNC13DQ70J99 1090 aa21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 EPM2AIP1Q7L775 607 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-209ENST00000409543 GPD1LQ8N335 351 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms