RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SV2CQ496J9 727 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 ZC2HC1CQ53FD0 456 aaPredicted RBP9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 CYP4A22Q5TCH4 519 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 OVOS1Q6IE37 1185 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 JADE1Q6IE81 842 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 ARMCX5Q6P1M9 558 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 PDILTQ8N807 584 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 CACTINQ8WUQ7 758 aaKnown RBP9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 FGF13Q92913 245 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 DNAJC19Q96DA6 116 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 SHDQ96IW2 340 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 ZNF512Q96ME7 567 aaPredicted RBP9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 HAPLN2Q9GZV7 340 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 SLC2A4RGQ9NR83 387 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 HSFX1Q9UBD0 423 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 INSL5Q9Y5Q6 135 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 MYO10Q9HD67 2058 aa9.84□□□□□ -0.83
SNORD88A-201ENST00000408314 UBE4BO95155 1302 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 MEFVO15553 781 aaPredicted RBP9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 GALR2O43603 387 aaPredicted RBP9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 N4BP1O75113 896 aaKnown RBP9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 AOC1P19801 751 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 HOXD11P31277 338 aaPredicted RBP9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 ME1P48163 572 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 ACOT2P49753 483 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 TAF6P49848 677 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 SNRPFP62306 86 aaKnown RBP9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 ASIC1P78348 528 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 NHLH1Q02575 133 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 SLC39A4Q6P5W5 647 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 PDZD4Q76G19 769 aaPredicted RBP9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 BRSK2Q8IWQ3 736 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 SIX5Q8N196 739 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 THEM5Q8N1Q8 247 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 SLC44A3Q8N4M1 653 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 FLCNQ8NFG4 579 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 C2orf15Q8WU43 125 aaKnown RBP9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 STRA6Q9BX79 667 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 GPR88Q9GZN0 384 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 KIAA1586Q9HCI6 787 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 ASAH2Q9NR71 780 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 ASB3Q9Y575 518 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 ATP6V1DQ9Y5K8 247 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 NUMBLQ9Y6R0 609 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 KMT2EQ8IZD2 1858 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 DOCK8Q8NF50 2099 aa9.83□□□□□ -0.84
SNORD88A-201ENST00000408314 ANO9A1A5B4 782 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 ANKRD63C9JTQ0 380 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 STK25O00506 426 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 PIRO00625 290 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 EIF3DO15371 548 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 ECI2O75521 394 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 CYP11A1P05108 521 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 RHOP08100 348 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 NFICP08651 508 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 ALDH1A3P47895 512 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 EPHB3P54753 998 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 VCPP55072 806 aaKnown RBP9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 LILRA4P59901 499 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 SPAG1Q07617 926 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 ADCY1Q08828 1119 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 GPR17Q13304 367 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 VEPH1Q14D04 833 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 ZBTB41Q5SVQ8 909 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 C9orf57Q5W0N0 161 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 PHLDB3Q6NSJ2 640 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 CNNM4Q6P4Q7 775 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 RSPO2Q6UXX9 243 aaPredicted RBP9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 HS2ST1Q7LGA3 356 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 ITIH5Q86UX2 942 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 NPAS3Q8IXF0 933 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 CEP57L1Q8IYX8 460 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 SPATA18Q8TC71 538 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 E2F7Q96AV8 911 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 DHX58Q96C10 678 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 SENP8Q96LD8 212 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 FAM213AQ9BRX8 229 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 PANK2Q9BZ23 570 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 TRIM9Q9C026 710 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 ARHGEF3Q9NR81 526 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 KBTBD4Q9NVX7 518 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 DPP3Q9NY33 737 aa9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 RBAKQ9NYW8 714 aaPredicted RBP9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 DNMT3BQ9UBC3 853 aaKnown RBP9.82□□□□□ -0.84
SNORD88A-201ENST00000408314 EXTL3O43909 919 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 PDGFBP01127 241 aaPredicted RBP9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 CFHP08603 1231 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 TMEM191BP0C7N4 346 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 TUFMP49411 452 aaKnown RBP9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 NTHL1P78549 312 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 TFAMQ00059 246 aaKnown RBP9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 TSPY1Q01534 308 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 PRKCQQ04759 706 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 TWF1Q12792 350 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 FAM26FQ5R3K3 315 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 DCP1BQ8IZD4 617 aaKnown RBP9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 GPD1LQ8N335 351 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 LRRC52Q8N7C0 313 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 PRSS33Q8NF86 280 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 RSAD2Q8WXG1 361 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms