RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 KLHL11Q9NVR0 708 aa7.84□□□□□ -1.15
PTPN12-202ENST00000407343 PIH1D1Q9NWS0 290 aaKnown RBP7.84□□□□□ -1.15
PTPN12-202ENST00000407343 USP25Q9UHP3 1055 aa7.84□□□□□ -1.15
PTPN12-202ENST00000407343 TPCN1Q9ULQ1 816 aa7.84□□□□□ -1.15
PTPN12-202ENST00000407343 CYP27B1O15528 508 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 PQBP1O60828 265 aaKnown RBP7.83□□□□□ -1.16
PTPN12-202ENST00000407343 ABHD16AO95870 558 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 ACRV1P26436 265 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 SLC7A1P30825 629 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 PIK3CBP42338 1070 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 RHBDL3P58872 404 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 PSMC1P62191 440 aaKnown RBP7.83□□□□□ -1.16
PTPN12-202ENST00000407343 TOB2Q14106 344 aaPredicted RBP7.83□□□□□ -1.16
PTPN12-202ENST00000407343 PPP1R32Q7Z5V6 425 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 NUP133Q8WUM0 1156 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 SCAMP4Q969E2 229 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 HSFX1Q9UBD0 423 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 CPNE7Q9UBL6 633 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 PHTF1Q9UMS5 762 aa7.83□□□□□ -1.16
PTPN12-202ENST00000407343 ZNF785A8K8V0 405 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 GOLGA6L6A8MZA4 724 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 ISM1B1AKI9 464 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 ELANEP08246 267 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 GNAI3P08754 354 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 CKBP12277 381 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 ZFP36P26651 326 aaKnown RBP7.82□□□□□ -1.16
PTPN12-202ENST00000407343 ALDH5A1P51649 535 aaPredicted RBP7.82□□□□□ -1.16
PTPN12-202ENST00000407343 GNAI1P63096 354 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 FMO1Q01740 532 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 EFEMP1Q12805 493 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 PDCD4Q53EL6 469 aaKnown RBP7.82□□□□□ -1.16
PTPN12-202ENST00000407343 SESTD1Q86VW0 696 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 PDPRQ8NCN5 879 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 PHKBQ93100 1093 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 LRIG1Q96JA1 1093 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 PHACTR3Q96KR7 559 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 STRBPQ96SI9 672 aaKnown RBP7.82□□□□□ -1.16
PTPN12-202ENST00000407343 C1QTNF3Q9BXJ4 246 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 LRRC27Q9C0I9 530 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 TINAGL1Q9GZM7 467 aaPredicted RBP7.82□□□□□ -1.16
PTPN12-202ENST00000407343 SMPD4Q9NXE4 827 aa7.82□□□□□ -1.16
PTPN12-202ENST00000407343 PLIN1O60240 522 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 MGEA5O60502 916 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 TOB1P50616 345 aaPredicted RBP7.81□□□□□ -1.16
PTPN12-202ENST00000407343 ZNF135P52742 658 aaPredicted RBP7.81□□□□□ -1.16
PTPN12-202ENST00000407343 RNASE9P60153 205 aaKnown RBP7.81□□□□□ -1.16
PTPN12-202ENST00000407343 HABP2Q14520 560 aaPredicted RBP7.81□□□□□ -1.16
PTPN12-202ENST00000407343 CNGA2Q16280 664 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 HS1BP3Q53T59 392 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 LCE4AQ5TA78 99 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 TMPRSS6Q8IU80 811 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 Q8NA96 180 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 OR56A1Q8NGH5 318 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 MARS2Q96GW9 593 aaKnown RBP7.81□□□□□ -1.16
PTPN12-202ENST00000407343 NUP62CLQ9H1M0 184 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 DEF6Q9H4E7 631 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 ETAA1Q9NY74 926 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 CEP72Q9P209 647 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 TCAF1Q9Y4C2 921 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 TESMINQ9Y4I5 508 aa7.81□□□□□ -1.16
PTPN12-202ENST00000407343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.81□□□□□ -1.161e-6■□□□□ 9
PTPN12-202ENST00000407343 ARID1BQ8NFD5 2236 aaPredicted RBP7.8□□□□□ -1.16
PTPN12-202ENST00000407343 MARCH11A6NNE9 402 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 TRIM24O15164 1050 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 MYL3P08590 195 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 FDXRP22570 491 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 CASP5P51878 434 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 SUMO3P55854 103 aaPredicted RBP7.8□□□□□ -1.16
PTPN12-202ENST00000407343 FAM189BP81408 668 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 PRKD1Q15139 912 aaPredicted RBP7.8□□□□□ -1.16
PTPN12-202ENST00000407343 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 PPP4R4Q6NUP7 873 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 TMPRSS9Q7Z410 1059 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 C11orf96Q7Z7L8 435 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 SLC17A8Q8NDX2 589 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 PARD3BQ8TEW8 1205 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 MSLNLQ96KJ4 702 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 ZNF768Q9H5H4 540 aaKnown RBP7.8□□□□□ -1.16
PTPN12-202ENST00000407343 COL20A1Q9P218 1284 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 FNIP2Q9P278 1114 aa7.8□□□□□ -1.16
PTPN12-202ENST00000407343 USP15Q9Y4E8 981 aaPredicted RBP7.8□□□□□ -1.16
PTPN12-202ENST00000407343 F8W8V4 182 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 NBPF7P0C2Y1 421 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-202ENST00000407343 MAGEA10P43363 369 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-202ENST00000407343 PRIM2P49643 509 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 SLC25A3Q00325 362 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 OCA2Q04671 838 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 PICALMQ13492 652 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 TSHZ3Q63HK5 1081 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 USP37Q86T82 979 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 MICU3Q86XE3 530 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 CFAP52Q8N1V2 620 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 ZSWIM1Q9BR11 485 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 IMPG2Q9BZV3 1241 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 CNNM1Q9NRU3 951 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 CTTNBP2NLQ9P2B4 639 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-202ENST00000407343 AATKQ6ZMQ8 1374 aa7.79□□□□□ -1.16
PTPN12-202ENST00000407343 A0A1B0GTW7 788 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms