RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 MSTO1Q9BUK6 570 aa15.75■□□□□ 0.11
SMARCE1-204ENST00000400122 BACH2Q9BYV9 841 aa15.75■□□□□ 0.11
SMARCE1-204ENST00000400122 TBC1D17Q9HA65 648 aa15.75■□□□□ 0.11
SMARCE1-204ENST00000400122 TRPV4Q9HBA0 871 aa15.75■□□□□ 0.11
SMARCE1-204ENST00000400122 DLGAP2Q9P1A6 1054 aa15.75■□□□□ 0.11
SMARCE1-204ENST00000400122 TUBGCP4Q9UGJ1 667 aa15.75■□□□□ 0.11
SMARCE1-204ENST00000400122 ASB3Q9Y575 518 aa15.75■□□□□ 0.11
SMARCE1-204ENST00000400122 OTOGLQ3ZCN5 2332 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 FRMD3A2A2Y4 597 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 LACTBL1A8MY62 500 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 H0Y858 1186 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 PIRO00625 290 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 MATR3P43243 847 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 MLLT6P55198 1093 aaPredicted RBP15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 LILRA4P59901 499 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 NTHL1P78549 312 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 DNASE1L2Q92874 299 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 E2F7Q96AV8 911 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 EPSTI1Q96J88 318 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 PHOX2BQ99453 314 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 CYP4F11Q9HBI6 524 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 DSEQ9UL01 958 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 POLIQ9UNA4 740 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 EXOC7Q9UPT5 735 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 SIT1Q9Y3P8 196 aa15.74■□□□□ 0.11
SMARCE1-204ENST00000400122 VPS37CA5D8V6 355 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 PI15O43692 258 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 GFRA3O60609 400 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 SEC24AO95486 1093 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 MYBP10242 640 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 TNFSF9P41273 254 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 NASPP49321 788 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 GPC5P78333 572 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 CYP4A22Q5TCH4 519 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 MAMSTRQ6ZN01 415 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 SV2BQ7L1I2 683 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 PJA1Q8NG27 643 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 DNAJC19Q96DA6 116 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 HCFC1R1Q9NWW0 138 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 CLIC4Q9Y696 253 aa15.73■□□□□ 0.11
SMARCE1-204ENST00000400122 KANSL1LA0AUZ9 987 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 IL18RAPO95256 599 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 FGF19O95750 216 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 LDHAP00338 332 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 ODC1P11926 461 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 GLULP15104 373 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 WEE1P30291 646 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 ADCY1Q08828 1119 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 TMEM132DQ14C87 1099 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 ANGPT1Q15389 498 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 SLC5A9Q2M3M2 681 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 SEZ6Q53EL9 994 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 RRAGBQ5VZM2 374 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 C9orf57Q5W0N0 161 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 USP37Q86T82 979 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 SPATA18Q8TC71 538 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 C2orf15Q8WU43 125 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 SNX21Q969T3 373 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 ZNF512Q96ME7 567 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 IER2Q9BTL4 223 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 RPP25Q9BUL9 199 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 CUEDC2Q9H467 287 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 ZMYM5Q9UJ78 669 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 AGO2Q9UKV8 859 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 MTMR6Q9Y217 621 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 PCDHB13Q9Y5F0 798 aa15.72■□□□□ 0.11
SMARCE1-204ENST00000400122 FRYLO94915 3013 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 TSC2P49815 1807 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 TCHHQ07283 1943 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 K7ELQ4 463 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 GARTP22102 1010 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 NMT1P30419 496 aaKnown RBP15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 MLF2Q15773 248 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 ZNF528Q3MIS6 628 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 SLC44A4Q53GD3 710 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 ADALQ6DHV7 355 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 OVOS1Q6IE37 1185 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 JADE1Q6IE81 842 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 CNNM4Q6P4Q7 775 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 C1orf228Q6PIY5 440 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 PDZD4Q76G19 769 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 DEPDC1BQ8WUY9 529 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 CLDN23Q96B33 292 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 ASB16Q96NS5 453 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 LRRC27Q9C0I9 530 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 ZFP14Q9HCL3 533 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 ASAH2Q9NR71 780 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 CA14Q9ULX7 337 aa15.71■□□□□ 0.11
SMARCE1-204ENST00000400122 PRR23AA6NEV1 266 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 SOBPA7XYQ1 873 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 STX6O43752 255 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 PPP6R2O75170 966 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 CPB1P15086 417 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 RFX1P22670 979 aa15.7■□□□□ 0.1
SMARCE1-204ENST00000400122 ADSSP30520 456 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms