RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 EPN3Q9H201 632 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 VPS28Q9UK41 221 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 IFRD1O00458 451 aaPredicted RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 MAP3K7CLP57077 242 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 NLRP9Q7RTR0 991 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 TRMT11Q7Z4G4 463 aaKnown RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 IL1RL2Q9HB29 575 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 SAE1Q9UBE0 346 aaPredicted RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 PAIP2BQ9ULR5 123 aaKnown RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 COQ6Q9Y2Z9 468 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 UTYO14607 1347 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 MMP1P03956 469 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 STIP1P31948 543 aaKnown RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 E2F5Q15329 346 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 SNCBQ16143 134 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 EIF2AK1Q9BQI3 630 aaKnown RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 ADAM33Q9BZ11 813 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 ALG13Q9NP73 1137 aaKnown RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 SYBUQ9NX95 663 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 ZFXP17010 805 aaPredicted RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 BLOC1S5Q8TDH9 187 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 TUBGCP3Q96CW5 907 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 MED8Q96G25 268 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 PBKQ96KB5 322 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 OMDQ99983 421 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 PKD2L2Q9NZM6 624 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 DBNLQ9UJU6 430 aaKnown RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 DCTN4Q9UJW0 460 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 ANAPC2Q9UJX6 822 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 MAN1B1Q9UKM7 699 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 PADI4Q9UM07 663 aa11.8□□□□□ -0.52
RGPD2-201ENST00000398146 COPG1Q9Y678 874 aaKnown RBP11.8□□□□□ -0.52
RGPD2-201ENST00000398146 PCSK1P29120 753 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 TRIP4Q15650 581 aaPredicted RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 FAAH2Q6GMR7 532 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ATP6V0D2Q8N8Y2 350 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ACTR5Q9H9F9 607 aaPredicted RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 FEN1P39748 380 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 EFNA5P52803 228 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ACTR2P61160 394 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 CDR2LQ86X02 465 aaPredicted RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 JAMLQ86YT9 394 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ZNF70Q9UC06 446 aaPredicted RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 MROH7-TTC4A0A0A0MT08 1334 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 NPHP3-ACAD11A0A0J9YXS1 232 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 RASA4BC9J798 803 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ASAP2O43150 1006 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 RASA4O43374 803 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 EIF3EP60228 445 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 QRICH1Q2TAL8 776 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ARHGAP17Q68EM7 881 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 NOTUMQ6P988 496 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 INTS2Q9H0H0 1204 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 KRCC1Q9NPI7 259 aaPredicted RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 PCMTD2Q9NV79 361 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 DYRK1BQ9Y463 629 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 SNX8Q9Y5X2 465 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 B3GAT3O94766 335 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 PRIM2P49643 509 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 MTFR1Q15390 333 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 MAPRE1Q15691 268 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 PCSK9Q8NBP7 692 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 LNPEPQ9UIQ6 1025 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 C19orf81C9J6K1 198 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ACSL4O60488 711 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 NUP62P37198 522 aaPredicted RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 GPC5P78333 572 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ACOX1Q15067 660 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 SETD3Q86TU7 594 aaPredicted RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 IFNEQ86WN2 208 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 FMO2Q99518 471 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ADAMTS1Q9UHI8 967 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 LZTS1Q9Y250 596 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 PPP6R2O75170 966 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 GSTM1P09488 218 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 USP10Q14694 798 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 C1orf146Q5VVC0 180 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 ABCC10Q5T3U5 1492 aa11.79□□□□□ -0.52
RGPD2-201ENST00000398146 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
RGPD2-201ENST00000398146 GOLGA8RI6L899 631 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 PRPF3O43395 683 aaKnown RBP11.78□□□□□ -0.52
RGPD2-201ENST00000398146 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 TRIM65Q6PJ69 517 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 GTF3C2Q8WUA4 911 aaPredicted RBP11.78□□□□□ -0.52
RGPD2-201ENST00000398146 BTBD9Q96Q07 612 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 ADI1Q9BV57 179 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 EXOSC4Q9NPD3 245 aaKnown RBP11.78□□□□□ -0.52
RGPD2-201ENST00000398146 HOXA2O43364 376 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 FAM107AO95990 144 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 ERFP50548 548 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 BBS7Q8IWZ6 715 aa11.78□□□□□ -0.52
RGPD2-201ENST00000398146 SYTL5Q8TDW5 730 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms