RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 EEF1DP3Q658K8 133 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 CCDC105Q8IYK2 499 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 NXF1Q9UBU9 619 aaKnown RBP17.19■□□□□ 0.34
SNX6-202ENST00000396526 FAM189A1O60320 539 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 SYF2O95926 243 aaKnown RBP17.19■□□□□ 0.34
SNX6-202ENST00000396526 LEKR1Q6ZMV7 388 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 CD101Q93033 1021 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 ZBTB9Q96C00 473 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 ERP44Q9BS26 406 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 B4GALT5O43286 388 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 DAPK3O43293 454 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 HOXC6P09630 235 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 MAN1A1P33908 653 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 ZFYVE27Q5T4F4 411 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 DPH5Q9H2P9 285 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 MTRF1LQ9UGC7 380 aaKnown RBP17.18■□□□□ 0.34
SNX6-202ENST00000396526 ABLIM1O14639 778 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 PROSCO94903 275 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 STAG3L1P0CL83 205 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 PYGMP11217 842 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 CD19P15391 556 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 TAP1Q03518 808 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 DCUN1D2Q6PH85 259 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 MTHFD1LQ6UB35 978 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 MON1BQ7L1V2 547 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 RHOT1Q8IXI2 618 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 HOMER3Q9NSC5 361 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 IP6K2Q9UHH9 426 aa17.18■□□□□ 0.34
SNX6-202ENST00000396526 A6NNZ2 444 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 SNAI1O95863 264 aaPredicted RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 ZNF286BP0CG31 522 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 TUBB8Q3ZCM7 444 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 TMEM63BQ5T3F8 832 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 ZNF410Q86VK4 478 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 CDR2LQ86X02 465 aaPredicted RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 TTC39CQ8N584 583 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 TRIM31Q9BZY9 425 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 TLR3O15455 904 aaKnown RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 CALCAP01258 141 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 CXCL8P10145 99 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 ATICP31939 592 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 CYP2C19P33261 490 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 HSPA9P38646 679 aaKnown RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 GRIK4Q16099 956 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 MMS22LQ6ZRQ5 1243 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 UMODL1Q5DID0 1318 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 GYS2P54840 703 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 DRG2P55039 364 aaKnown RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 ZNF394Q53GI3 561 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 CCDC137Q6PK04 289 aaKnown RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 FEZF2Q8TBJ5 459 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 CELF4Q9BZC1 486 aaKnown RBP17.17■□□□□ 0.34
SNX6-202ENST00000396526 IFT122Q9HBG6 1241 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 STRIP2Q9ULQ0 834 aa17.17■□□□□ 0.34
SNX6-202ENST00000396526 WEE2P0C1S8 567 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 FAM153BP0C7A2 387 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 CAPN2P17655 700 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 EIF4BP23588 611 aaKnown RBP17.16■□□□□ 0.34
SNX6-202ENST00000396526 MARCKSL1P49006 195 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 FNTAP49354 379 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 ZNF132P52740 706 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 WDR72Q3MJ13 1102 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 FAM153CQ494X1 144 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 DNAJC24Q6P3W2 148 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 CCDC50Q8IVM0 306 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 ACAP3Q96P50 834 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 FMO2Q99518 471 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 C16orf70Q9BSU1 422 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 MINDY3Q9H8M7 445 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 PCYOX1Q9UHG3 505 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 FAM153AQ9UHL3 310 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 MCM3APO60318 1980 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 VTNP04004 478 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 PLEKHA7Q6IQ23 1121 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 SCARA5Q6ZMJ2 495 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 PHLDB2Q86SQ0 1253 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 NT5DC4Q86YG4 428 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 JAMLQ86YT9 394 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 CD302Q8IX05 232 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 TSEN2Q8NCE0 465 aaKnown RBP17.16■□□□□ 0.34
SNX6-202ENST00000396526 ZIM3Q96PE6 472 aa17.16■□□□□ 0.34
SNX6-202ENST00000396526 PSTPIP1O43586 416 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 PPP1R7Q15435 360 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 RUFY4Q6ZNE9 571 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNX6-202ENST00000396526 IQCKQ8N0W5 287 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 CEP120Q8N960 986 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 GRK7Q8WTQ7 553 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
SNX6-202ENST00000396526 SEC14L1Q92503 715 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 PPP1R16BQ96T49 567 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 GCOM2Q9BZD3 368 aaPredicted RBP17.15■□□□□ 0.34
SNX6-202ENST00000396526 AGPSO00116 658 aa17.15■□□□□ 0.34
SNX6-202ENST00000396526 GPR25O00155 361 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms