RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZNF394Q53GI3 561 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 MORN1Q5T089 497 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 LLGL2Q6P1M3 1020 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 C10orf67Q8IYJ2 551 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 ADAM22Q9P0K1 906 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
ITGB1-202ENST00000396033 ANK1P16157 1881 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 FAM193AP78312 1265 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 PACS2Q86VP3 889 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 SETD4Q9NVD3 440 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 MROH7Q68CQ1 1323 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 WEE2P0C1S8 567 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 CTNNA2P26232 953 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 PEX5P50542 639 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 ZNF606Q8WXB4 792 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 CAVIN3Q969G5 261 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 XYLT2Q9H1B5 865 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
ITGB1-202ENST00000396033 MANSC4A6NHS7 340 aaPredicted RBP12.94□□□□□ -0.34
ITGB1-202ENST00000396033 TSPAN1O60635 241 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 BRD2P25440 801 aaKnown RBP12.94□□□□□ -0.34
ITGB1-202ENST00000396033 ASPAP45381 313 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 JADE1Q6IE81 842 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 MMS22LQ6ZRQ5 1243 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 MAATS1Q7Z4T9 603 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 KIAA0319LQ8IZA0 1049 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 TRIM7Q9C029 511 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 NR2E1Q9Y466 385 aa12.94□□□□□ -0.34
ITGB1-202ENST00000396033 TRADDQ15628 312 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 PPP1R2P3Q6NXS1 205 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 LENG1Q96BZ8 264 aaPredicted RBP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 FAM49AQ9H0Q0 323 aaPredicted RBP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 PCDHA3Q9Y5H8 950 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 AARSP49588 968 aaKnown RBP eCLIP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 YWHAEP62258 255 aaKnown RBP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 NNTQ13423 1086 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 ZSCAN26Q16670 478 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 SRLQ86TD4 932 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 TLK2Q86UE8 772 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 ZNF410Q86VK4 478 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 PHF13Q86YI8 300 aaPredicted RBP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 C1orf127Q8N9H9 656 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 ERVK-5Q9HDB9 667 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 MED4Q9NPJ6 270 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 FLRT1Q9NZU1 646 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 SIX4Q9UIU6 781 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 GINS2Q9Y248 185 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 KAT6AQ92794 2004 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 MGAMO43451 1857 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 RRN3P2A6NIE6 340 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 MYO1FO00160 1098 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 TTI1O43156 1089 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 PYGMP11217 842 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 RWDD2BP57060 319 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 KIZQ2M2Z5 673 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 ZNF667Q5HYK9 610 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 FAM71BQ8TC56 605 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 PPP1R13LQ8WUF5 828 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 ADPGKQ9BRR6 497 aa12.93□□□□□ -0.34
ITGB1-202ENST00000396033 CELF4Q9BZC1 486 aaKnown RBP12.93□□□□□ -0.34
ITGB1-202ENST00000396033 GOLGA6BA6NDN3 693 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 MEFVO15553 781 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-202ENST00000396033 ITGB3P05106 788 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 HSPA6P17066 643 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 FGFR4P22455 802 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 RAP1GAPP47736 663 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 GUCY2FP51841 1108 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 TMEM62Q0P6H9 643 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 PPP2R5EQ16537 467 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 KYAT1Q16773 422 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 TMEM130Q8N3G9 435 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 VCPIP1Q96JH7 1222 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 A6NJR5 290 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 ANKRD65E5RJM6 399 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 FAM153BP0C7A2 387 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 SMIM10L2AP0DMW4 78 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 SMIM10L2BP0DMW5 78 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-202ENST00000396033 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
ITGB1-202ENST00000396033 CUL1Q13616 776 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 FAM153CQ494X1 144 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 ASB7Q9H672 318 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 MRPL47Q9HD33 250 aaKnown RBP12.92□□□□□ -0.34
ITGB1-202ENST00000396033 VPS18Q9P253 973 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 FAM153AQ9UHL3 310 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 GNEQ9Y223 722 aaKnown RBP12.92□□□□□ -0.34
ITGB1-202ENST00000396033 SCINQ9Y6U3 715 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 F2P00734 622 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 CCL14Q16627 93 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 KCTD19Q17RG1 926 aaPredicted RBP12.92□□□□□ -0.34
ITGB1-202ENST00000396033 WDR72Q3MJ13 1102 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 OLFML2BQ68BL8 750 aa12.92□□□□□ -0.34
ITGB1-202ENST00000396033 C1orf131Q8NDD1 294 aaKnown RBP12.92□□□□□ -0.34
ITGB1-202ENST00000396033 DOCK3Q8IZD9 2030 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms