RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CCDC170Q8IYT3 715 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 HACE1Q8IYU2 909 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 LRRC43Q8N309 656 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 CEP120Q8N960 986 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 GSTCDQ8NEC7 633 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 FBXL13Q8NEE6 735 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 TAS1R2Q8TE23 839 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 FAM84AQ96KN4 292 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 FAM161BQ96MY7 647 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 GAD1Q99259 594 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 CERS4Q9HA82 394 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 TBC1D13Q9NVG8 400 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 MIOSQ9NXC5 875 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 ARHGAP20Q9P2F6 1191 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 COQ4Q9Y3A0 265 aa14.6□□□□□ -0.07
PTN-202ENST00000393083 EPN1Q9Y6I3 576 aaPredicted RBP14.6□□□□□ -0.07
PTN-202ENST00000393083 SERPING1P05155 500 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 BMPR1AP36894 532 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 MLH1P40692 756 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 GRM5P41594 1212 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 OSTNP61366 133 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 SURF1Q15526 300 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 C15orf39Q6ZRI6 1047 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 ARHGEF19Q8IW93 802 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 REXO1L1PQ8IX06 675 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 ARNTL2Q8WYA1 636 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 ZNF516Q92618 1163 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 SEMA4DQ92854 862 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 ZFP42Q96MM3 310 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 GUCD1Q96NT3 240 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 SAMD11Q96NU1 681 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 MRPL9Q9BYD2 267 aaKnown RBP14.59□□□□□ -0.07
PTN-202ENST00000393083 CXCL16Q9H2A7 254 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 DEF6Q9H4E7 631 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 MTMR10Q9NXD2 777 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 AIPL1Q9NZN9 384 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 MTUS1Q9ULD2 1270 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 INPP5FQ9Y2H2 1132 aa14.59□□□□□ -0.07
PTN-202ENST00000393083 GOLGA6L9A6NEM1 432 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 C5orf67F2Z3F1 127 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 F8VZ95 297 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 MEFVO15553 781 aaPredicted RBP14.58□□□□□ -0.08
PTN-202ENST00000393083 LRRN2O75325 713 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 RECQL4O94761 1208 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 EIF4A3P38919 411 aaKnown RBP14.58□□□□□ -0.08
PTN-202ENST00000393083 STAT1P42224 750 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 PIK3CAP42336 1068 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 ARID5AQ03989 594 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 BIRC3Q13489 604 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 ZACNQ401N2 412 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 TDRD10Q5VZ19 366 aaKnown RBP14.58□□□□□ -0.08
PTN-202ENST00000393083 HGSNATQ68CP4 663 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 PHLDB3Q6NSJ2 640 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 WDR49Q8IV35 697 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 CCDC42Q96M95 316 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 STK33Q9BYT3 514 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 RPF1Q9H9Y2 349 aaKnown RBP14.58□□□□□ -0.08
PTN-202ENST00000393083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTN-202ENST00000393083 RAB20Q9NX57 234 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 KLK14Q9P0G3 267 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 PARP2Q9UGN5 583 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 RWDD3Q9Y3V2 267 aa14.58□□□□□ -0.08
PTN-202ENST00000393083 SSU72P8A0A1W2PR75 194 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 EIF3CLB5ME19 914 aaKnown RBP14.57□□□□□ -0.08
PTN-202ENST00000393083 RFXAPO00287 272 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 B4GALT3O60512 393 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 IPO7O95373 1038 aaKnown RBP14.57□□□□□ -0.08
PTN-202ENST00000393083 HLA-DRAP01903 254 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 C4BPAP04003 597 aaKnown RBP14.57□□□□□ -0.08
PTN-202ENST00000393083 CXCL8P10145 99 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 FERP16591 822 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 SOX5P35711 763 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 KIF11P52732 1056 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 KLHL30Q0D2K2 578 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 DRAP1Q14919 205 aaPredicted RBP14.57□□□□□ -0.08
PTN-202ENST00000393083 PTPN14Q15678 1187 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 ENOX2Q16206 610 aaKnown RBP14.57□□□□□ -0.08
PTN-202ENST00000393083 ARHGAP44Q17R89 818 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 XKR4Q5GH76 650 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 ALKAL1Q6UXT8 129 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 NYAP1Q6ZVC0 841 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 ZNF280BQ86YH2 543 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 URGCPQ8TCY9 931 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 NT5C1BQ96P26 610 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 EIF3CQ99613 913 aaKnown RBP14.57□□□□□ -0.08
PTN-202ENST00000393083 PRDM12Q9H4Q4 367 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 NRDE2Q9H7Z3 1164 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 UBE2TQ9NPD8 197 aaPredicted RBP14.57□□□□□ -0.08
PTN-202ENST00000393083 KANSL3Q9P2N6 904 aa14.57□□□□□ -0.08
PTN-202ENST00000393083 PTGESO14684 152 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 AKR1B10O60218 316 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 LPXNO60711 386 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 GFPT2O94808 682 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 DDHD2O94830 711 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 IL18RAPO95256 599 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 POMCP01189 267 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 RB1P06400 928 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 CLTAP09496 248 aa14.56□□□□□ -0.08
PTN-202ENST00000393083 PNMA6AP0CW24 399 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms