RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FOXO4P98177 505 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 CDK17Q00537 523 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 CDC16Q13042 620 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 SMU1Q2TAY7 513 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF618Q5T7W0 954 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 NT5DC1Q5TFE4 455 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 FASTKD5Q7L8L6 764 aaKnown RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 TMPRSS6Q8IU80 811 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 LRRC49Q8IUZ0 686 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 DCLK2Q8N568 766 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 METTL13Q8N6R0 699 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 SDR42E1Q8WUS8 393 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 SLC35B4Q969S0 331 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 KAZALD1Q96I82 304 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ISCA1Q9BUE6 129 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF287Q9HBT7 754 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ATPIF1Q9UII2 106 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 DENND2AQ9ULE3 1009 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ARHGEF9O43307 516 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 B3GALNT1O75752 331 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 USP1O94782 785 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 TTLL1O95922 423 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 PRLP01236 227 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 KRT6AP02538 564 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 KRT6BP04259 564 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 TFPTP0C1Z6 253 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ITGA4P13612 1032 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 CTNNA2P26232 953 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 CHRNA3P32297 505 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 STX1BP61266 288 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 EXOSC10Q01780 885 aaKnown RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 MSLNQ13421 630 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 SUZ12Q15022 739 aaKnown RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 NADK2Q4G0N4 442 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 PPP6R3Q5H9R7 873 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 SPDYCQ5MJ68 293 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 RSBN1Q5VWQ0 802 aaPredicted RBP8.02□□□□□ -1.13
VTI1A-201ENST00000393077 C4orf33Q8N1A6 199 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 CCDC89Q8N998 374 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 PYDC1Q8WXC3 89 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 TTC17Q96AE7 1141 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 SNX25Q9H3E2 840 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 ADGRB2O60241 1585 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 MAST3O60307 1309 aa8.02□□□□□ -1.13
VTI1A-201ENST00000393077 NUDT17P0C025 328 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 RARGP13631 454 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 YARSP54577 528 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PRAMEP78395 509 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PLOD1Q02809 727 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 FOLH1Q04609 750 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 AUHQ13825 339 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 COL9A3Q14050 684 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 GALNTL6Q49A17 601 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 MEI1Q5TIA1 1274 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ACTRT1Q8TDG2 376 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 SERPINI1Q99574 410 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CGREF1Q99674 301 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 KIAA1586Q9HCI6 787 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ALG13Q9NP73 1137 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 HERC5Q9UII4 1024 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 SMG5Q9UPR3 1016 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 EXOC7Q9UPT5 735 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 STARD13Q9Y3M8 1113 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CHKAP35790 457 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PIK3CAP42336 1068 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ENTPD1P49961 510 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PLS1Q14651 629 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 SYCP2LQ5T4T6 812 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 DEPDC1Q5TB30 811 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 FOXB2Q5VYV0 432 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CCDC137Q6PK04 289 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CENPUQ71F23 418 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 UTS2BQ765I0 119 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 CMTR1Q8N1G2 835 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 KCTD17Q8N5Z5 321 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 DUSP9Q99956 384 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 TSSK1BQ9BXA7 367 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PUS7LQ9H0K6 701 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 SPC25Q9HBM1 224 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 GPR108Q9NPR9 543 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 DIS3Q9Y2L1 958 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 A0A1W2PQJ5 194 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 FUOMA2VDF0 154 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 IDH3BO43837 385 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 GABBR2O75899 941 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 BAIAP3O94812 1187 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 PLS3P13797 630 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ARHGEF6Q15052 776 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 SLC18A3Q16572 532 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 DCAF17Q5H9S7 520 aaPredicted RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 EFHC1Q5JVL4 640 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 TWF2Q6IBS0 349 aaKnown RBP8.01□□□□□ -1.13
VTI1A-201ENST00000393077 RIPOR1Q6ZS17 1223 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 DHDDSQ86SQ9 333 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ZBTB46Q86UZ6 589 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF507Q8TCN5 953 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 GRK7Q8WTQ7 553 aa8.01□□□□□ -1.13
VTI1A-201ENST00000393077 WNK4Q96J92 1243 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms