RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 GJB7Q6PEY0 223 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 CATSPER3Q86XQ3 398 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 PKD2L2Q9NZM6 624 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 USP10Q14694 798 aaKnown RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 TEX9Q8N6V9 391 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 GFM2Q969S9 779 aaKnown RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 TRIM54Q9BYV2 358 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 DFFAO00273 331 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 POLRMTO00411 1230 aaKnown RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 RALAP11233 206 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 SPRP35270 261 aaPredicted RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 COBLL1Q53SF7 1204 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 RNF219Q5W0B1 726 aaPredicted RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 ZNF677Q86XU0 584 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 ASAP3Q8TDY4 903 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 AFG1LQ8WV93 481 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 RMDN1Q96DB5 314 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 CCDC134Q9H6E4 229 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 CHORDC1Q9UHD1 332 aaPredicted RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 GRID1Q9ULK0 1009 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 MADDQ8WXG6 1647 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 AIM2O14862 343 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 NR3C2P08235 984 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 IRX1P78414 480 aaPredicted RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 KRT33BQ14525 404 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 E2F7Q96AV8 911 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 NSL1Q96IY1 281 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 MANSC1Q9H8J5 431 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 CSPG5O95196 566 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 ATICP31939 592 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 SNRPFP62306 86 aaKnown RBP13.75□□□□□ -0.21
LCA5-202ENST00000392959 PPHLN1Q8NEY8 458 aaKnown RBP13.75□□□□□ -0.21
LCA5-202ENST00000392959 ASIC4Q96FT7 647 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 ZSWIM1Q9BR11 485 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 NDFIP2Q9NV92 336 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 TEKT2Q9UIF3 430 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 LOC100653049A0A140TA62 436 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 KRT34O76011 436 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 HMGCS2P54868 508 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 TTI2Q6NXR4 508 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 TAS2R42Q7RTR8 314 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 FEZF2Q8TBJ5 459 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 TEX13BQ9BXU2 312 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 SUFUQ9UMX1 484 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
LCA5-202ENST00000392959 HNRNPCL2B2RXH8 293 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 UBE2Q2LH0YL09 131 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 KCNV1Q6PIU1 500 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 FBXO33Q7Z6M2 555 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 PRUNE1Q86TP1 453 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 DAGLBQ8NCG7 672 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 LPAR1Q92633 364 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 TASP1Q9H6P5 420 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 OVOS2A0A0G2JMS6 1433 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 OVOS2A0A0J9YW53 1432 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 OVOS2Q6IE36 1432 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 AP5Z1O43299 807 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 AKAP10O43572 662 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 CYP11B2P19099 503 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 C6orf10Q5SRN2 563 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 PLA2G4FQ68DD2 849 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 TRIM65Q6PJ69 517 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 KDELC2Q7Z4H8 507 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 IFNEQ86WN2 208 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
LCA5-202ENST00000392959 KRT35Q92764 455 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 CASS4Q9NQ75 786 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 AGPAT3Q9NRZ7 376 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 MRGBPQ9NV56 204 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 ZNF212Q9UDV6 495 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 PCDHGB4Q9UN71 923 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 TNS3Q68CZ2 1445 aa13.75□□□□□ -0.21
LCA5-202ENST00000392959 SULT1E1P49888 294 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 COG2Q14746 738 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 C16orf89Q6UX73 402 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 PPIL6Q8IXY8 311 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 SCFD1Q8WVM8 642 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 DLGAP2Q9P1A6 1054 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 CCDC78A2IDD5 438 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 H0Y626 953 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 MYO1DO94832 1006 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 TRIM16O95361 564 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
LCA5-202ENST00000392959 DAB2IPQ5VWQ8 1189 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 PCYOX1LQ8NBM8 494 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 SEPT1Q8WYJ6 367 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 PTPRN2Q92932 1015 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 TEX12Q9BXU0 123 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 ADNPQ9H2P0 1102 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
LCA5-202ENST00000392959 SUPT3HO75486 399 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms