RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 ADGRF5Q8IZF2 1346 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RPTORQ8N122 1335 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF521Q96K83 1311 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF335Q9H4Z2 1342 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SALL1Q9NSC2 1324 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CNTNAP2Q9UHC6 1331 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGSF9BQ9UPX0 1349 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 WASHC2CQ9Y4E1 1318 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TEP1Q99973 2627 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLIT3O75094 1523 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLIT2O94813 1529 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RUSC2Q8N2Y8 1516 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CACNA1GO43497 2377 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CACNA1HO95180 2353 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NAV3Q8IVL0 2385 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 COL4A2P08572 1712 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 COL11A2P13942 1736 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 COL5A3P25940 1745 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 USP9YO00507 2555 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 USP9XQ93008 2570 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 EPG5Q9HCE0 2579 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NBEAL2Q6ZNJ1 2754 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGHV3OR16-10A0A075B7F0 116 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGKV1D-8A0A087WSZ0 117 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GIMAP1-GIMAP5A0A087WTJ2 511 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A087WUV0 522 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A087WWL8 130 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A087WWV3 80 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A087WZY1 265 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A088AWK7 358 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LOC105369274A0A096LPK9 316 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TRBV5-7A0A0A0MS05 114 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TRBV23-1A0A0A0MS06 115 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGKV6D-21A0A0A0MT36 114 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFSF12-TNFSF13A0A0A6YY99 330 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGHV3-16A0A0C4DH30 117 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGHV3-20A0A0C4DH32 117 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGHV4-28A0A0C4DH34 117 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGHV3-38A0A0C4DH36 116 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TRBV5-4A0A0C4DH59 114 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGKV1-6A0A0C4DH72 117 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CCDC163A0A0D9SF12 145 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A0D9SG42 100 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A0G2JLM5 398 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRAMEF33A0A0G2JMD5 474 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LOC102723532A0A0G2JNH3 316 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A0G2JNJ9 132 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IGLV5-39A0A0G2JS06 123 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TRBV5-5A0A0J9YX44 114 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PNMA6FA0A0J9YX94 578 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A0U1RQF3 1178 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM237AA0A1B0GTK4 181 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1B0GTW7 788 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1B0GVC2 190 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1B0GVM2 712 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1B0GVT2 93 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1B0GVX0 72 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1B0GW55 424 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PNN7 141 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SCO2A0A1W2PP80 73 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PPI3 338 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PPK0 400 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PPM1 405 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PPQ1 181 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PQF6 199 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PR77 199 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 WI2-2373I1.2A0A1W2PRP0 233 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 A0A1W2PS29 197 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ESYT2A0FGR8 921 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ESYT3A0FGR9 886 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GXYLT2A0PJZ3 443 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CCDC189A1A4V9 331 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM168BA1KXE4 195 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GAGE12BA1L429 117 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SH3PXD2BA1X283 911 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PTPDC1A2A3K4 754 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TARSL2A2RTX5 802 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM234BA2RU67 622 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MEIOCA2RUB1 952 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2M5A3KFT3 312 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRAMEF22A3QJZ6 481 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GTPBP10A4D1E9 387 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MTMR11A4FU01 709 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 EME2A4GXA9 379 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FITM1A5D6W6 292 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM149AA5PLN7 773 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KLHL33A6NCF5 533 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIM43BA6NCK2 446 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ANKRD33BA6NCL7 494 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR14I1A6ND48 311 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RBMY1BA6NDE4 496 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GAGE12HA6NDE8 117 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM90A10PA6NDY2 464 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MBD3L4A6NDZ8 208 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MBD3L3A6NE82 208 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NPEPPSL1A6NEC2 478 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RBMY1EA6NEQ0 496 aaKnown RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms