RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 RANBP17Q9H2T7 1088 aaKnown RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 ABCB6Q9NP58 842 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 TBC1D12O60347 775 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 HSPA8P11142 646 aaKnown RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 ELAVL2Q12926 359 aaKnown RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 TMEM132BQ14DG7 1078 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 AMHR2Q16671 573 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 DNAJB3Q8WWF6 145 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 CHP1Q99653 195 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 CGRRF1Q99675 332 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 TRIM54Q9BYV2 358 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 NDFIP2Q9NV92 336 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 KPNA7A9QM74 516 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 PSMD3O43242 534 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 AP1G2O75843 785 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 CTXN3Q4LDR2 81 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 SDE2Q6IQ49 451 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 RASGRP2Q7LDG7 609 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 ATP11CQ8NB49 1132 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 ATL2Q8NHH9 583 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 MKL1Q969V6 931 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 DCUN1D1Q96GG9 259 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 BAIAP2L1Q9UHR4 511 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 KIAA1257Q9ULG3 409 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 A0A1W2PQJ5 194 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 CASQ2O14958 399 aaPredicted RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 ATP9BO43861 1147 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 EGFRP00533 1210 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 PSEN2P49810 448 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 CASP8Q14790 479 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 MED1Q15648 1581 aaPredicted RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 RASSF3Q86WH2 238 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 ZBED8Q8IZ13 594 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 ULK4Q96C45 1275 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 CBWD1Q9BRT8 395 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 AGXT2Q9BYV1 514 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 PLAAQ9Y263 795 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 A0A087WUV0 522 aaPredicted RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 FBXL16Q8N461 479 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 PBXIP1Q96AQ6 731 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 DDX27Q96GQ7 796 aaKnown RBP10.81□□□□□ -0.68
PKP4-201ENST00000389757 KBTBD4Q9NVX7 518 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 HDAC6Q9UBN7 1215 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 PCDHB12Q9Y5F1 795 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 MYPNQ86TC9 1320 aa10.81□□□□□ -0.68
PKP4-201ENST00000389757 HMGB1P1B2RPK0 211 aaPredicted RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 MSCO60682 206 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SLC2A3P11169 496 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ADCYAP1R1P41586 468 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 RPL10AP62906 217 aaKnown RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 MTF1Q14872 753 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ZNF720Q7Z2F6 126 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 PPHLN1Q8NEY8 458 aaKnown RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 MRPS31Q92665 395 aaKnown RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 TTC17Q96AE7 1141 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SH3KBP1Q96B97 665 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 EGFL8Q99944 293 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 RASA4BC9J798 803 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 RASA4O43374 803 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 DNAJC6O75061 913 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ACO1P21399 889 aaKnown RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 OCRLQ01968 901 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SP3Q02447 781 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 POU5F1BQ06416 359 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 P3H1Q32P28 736 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ZNF280DQ6N043 979 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ADGRF2Q8IZF7 708 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 HAUS8Q9BT25 410 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 WDR18Q9BV38 432 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 DRC3Q9H069 523 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 RASSF4Q9H2L5 321 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 FAN1Q9Y2M0 1017 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ADCY3O60266 1144 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 NR1D1P20393 614 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 FXR1P51114 621 aaKnown RBP eCLIP10.8□□□□□ -0.68
PKP4-201ENST00000389757 PMS2P54278 862 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 COPS2P61201 443 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 TMPRSS15P98073 1019 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 EPC2Q52LR7 807 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 KDELC2Q7Z4H8 507 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 CYP2W1Q8TAV3 490 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ZBTB18Q99592 522 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 TINF2Q9BSI4 451 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SUDS3Q9H7L9 328 aaPredicted RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 G3BP2Q9UN86 482 aaKnown RBP10.8□□□□□ -0.68
PKP4-201ENST00000389757 CFAP69A5D8W1 941 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SLC15A5A6NIM6 579 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 FAM86B1E9PN63 330 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ALDH2P05091 517 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 FAM86B2P0C5J1 330 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 TMEM253P0C7T8 217 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 SPARCL1Q14515 664 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ZSCAN26Q16670 478 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ATP6V0D2Q8N8Y2 350 aa10.8□□□□□ -0.68
PKP4-201ENST00000389757 ENGASEQ8NFI3 743 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms