RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SH2D3CQ8N5H7 860 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SCAIQ8N9R8 606 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 VPS11Q9H270 941 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ASS1P00966 412 aaKnown RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 PSEN1P49768 467 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 LRRC74AQ0VAA2 488 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 PAN2Q504Q3 1202 aaKnown RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 LRRC20Q8TCA0 184 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 NPHP4O75161 1426 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 SPDYE5A6NIY4 337 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 ABLIM1O14639 778 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 MORF4L2Q15014 288 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 FAM45BPQ6NSW5 357 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 CCNYL1Q8N7R7 359 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 KRT84Q9NSB2 600 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 FBXO28Q9NVF7 368 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 ASPRV1Q53RT3 343 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 KLHL17Q6TDP4 642 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 CLEC4GQ6UXB4 293 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 AIFM3Q96NN9 605 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 KANSL2Q9H9L4 492 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 GPBP1L1Q9HC44 474 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 BAIAP2Q9UQB8 552 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 TTLL13PA6NNM8 815 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 PLA2G4BP0C869 781 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 ABATP80404 500 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 OTUD4Q01804 1114 aaKnown RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 KLF15Q9UIH9 416 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 KCNH4Q9UQ05 1017 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 CENPXA8MT69 81 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 SEMA3EO15041 775 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 RGS5O15539 181 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 PDE8BO95263 885 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 CHEK2O96017 543 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 TRAP1Q12931 704 aaKnown RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 THTPAQ9BU02 230 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 KLHL11Q9NVR0 708 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 LIMA1Q9UHB6 759 aaKnown RBP11.28□□□□□ -0.6
CLCN4-202ENST00000380833 PCDHA13Q9Y5I0 950 aa11.28□□□□□ -0.6
CLCN4-202ENST00000380833 STAT3P40763 770 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 CDK8P49336 464 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 PWP1Q13610 501 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 TCEA2Q15560 299 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 ZNF699Q32M78 642 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 ALKBH2Q6NS38 261 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 C16orf89Q6UX73 402 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 C16orf62Q7Z3J2 963 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 TRIM69Q86WT6 500 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 IL17REQ8NFR9 667 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 RASSF5Q8WWW0 418 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 PUS7LQ9H0K6 701 aaKnown RBP11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L15C9J2P7 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L11C9JVI0 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L18D6R9N7 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L22D6RA61 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L19D6RCP7 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L20D6RJB6 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 CCDC130P13994 396 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 NUP62P37198 522 aaPredicted RBP11.27□□□□□ -0.6
CLCN4-202ENST00000380833 KDSRQ06136 332 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 DDR1Q08345 913 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L24Q0WX57 530 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 ARID5BQ14865 1188 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 NR1D2Q14995 579 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 USP17L6PQ6QN14 398 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 OR6J1Q8NGC5 347 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 NHEJ1Q9H9Q4 299 aaPredicted RBP11.27□□□□□ -0.6
CLCN4-202ENST00000380833 MOV10Q9HCE1 1003 aaKnown RBP11.27□□□□□ -0.6
CLCN4-202ENST00000380833 ARHGEF3Q9NR81 526 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 PCDHA5Q9Y5H7 936 aa11.27□□□□□ -0.6
CLCN4-202ENST00000380833 KBTBD13C9JR72 458 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 CLDN3O15551 220 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 AKAP10O43572 662 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 TRIM13O60858 407 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 TNFAIP8O95379 198 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 GYS1P13807 737 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 CMA1P23946 247 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 MAPRE2Q15555 327 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 KYNUQ16719 465 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 WASHC2DQ5SRD0 308 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 SLC44A5Q8NCS7 719 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 MYCBPAPQ8TBZ2 947 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.61
CLCN4-202ENST00000380833 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 CEP170Q5SW79 1584 aa11.27□□□□□ -0.61
CLCN4-202ENST00000380833 PRRG1O14668 218 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms