RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HOXD13P35453 343 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 GUCY2FP51841 1108 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 RBM10P98175 930 aaKnown RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 GUCA2AQ02747 115 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 DLX2Q07687 328 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 EHHADHQ08426 723 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 DPYDQ12882 1025 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 ELAVL2Q12926 359 aaKnown RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 STK4Q13043 487 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 PSMD2Q13200 908 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 ADAM15Q13444 863 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 CLUL1Q15846 466 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 QPCTQ16769 361 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 UPP1Q16831 310 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 USP41Q3LFD5 358 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 FAM171A1Q5VUB5 890 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 JADE1Q6IE81 842 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 CRELD2Q6UXH1 353 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 CD302Q8IX05 232 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 ZSWIM2Q8NEG5 633 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 RIN2Q8WYP3 895 aaPredicted RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 MSLNLQ96KJ4 702 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 KLHL5Q96PQ7 755 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 IRF2BPLQ9H1B7 796 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 CD207Q9UJ71 328 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 UBQLN1Q9UMX0 589 aaKnown RBP10.02□□□□□ -0.81
HMGN1-202ENST00000380747 SSX2IPQ9Y2D8 614 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 NUB1Q9Y5A7 615 aa10.02□□□□□ -0.81
HMGN1-202ENST00000380747 FSD2A1L4K1 749 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TMEM221A6NGB7 291 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 GOLGA8CPA6NN73 597 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 LOC730098B7Z3J9 87 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TMEM189-UBE2V1I3L0A0 370 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 M0R296 226 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 KIAA0391O15091 583 aaKnown RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 CLIC2O15247 247 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TRAPPC3O43617 180 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 KINO60870 393 aaKnown RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 EFEMP2O95967 443 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 NFICP08651 508 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 KLRC2P26717 231 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 RPL9P32969 192 aaKnown RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 MCM4P33991 863 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 BRCC3P46736 316 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 CYP2J2P51589 502 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 DSG1Q02413 1049 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TCF15Q12870 199 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 PNOCQ13519 176 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 SNW1Q13573 536 aaKnown RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TMEM132DQ14C87 1099 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 BMT2Q1RMZ1 405 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 RTP2Q5QGT7 225 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 KIAA0319Q5VV43 1072 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 PRSS55Q6UWB4 352 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 CD300LGQ6UXG3 332 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 HS2ST1Q7LGA3 356 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 GLYCTKQ8IVS8 523 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 SUGP1Q8IWZ8 645 aaKnown RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 RNF168Q8IYW5 571 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 GPD1LQ8N335 351 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TMEM130Q8N3G9 435 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 FBXL6Q8N531 539 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 SMRP1Q8NCR6 262 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 KIAA0895Q8NCT3 520 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 C3orf58Q8NDZ4 430 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 ENGASEQ8NFI3 743 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 BEST2Q8NFU1 509 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 VN1R2Q8NFZ6 395 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 PBXIP1Q96AQ6 731 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 IPO9Q96P70 1041 aaKnown RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TTPALQ9BTX7 342 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 ASB7Q9H672 318 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 AGPAT3Q9NRZ7 376 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 RBAKQ9NYW8 714 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 HSPBP1Q9NZL4 362 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 BARX2Q9UMQ3 279 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 IRAK3Q9Y616 596 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TDRD15B5MCY1 1934 aaKnown RBP10.01□□□□□ -0.81
HMGN1-202ENST00000380747 TCHHQ07283 1943 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 GVINP1Q7Z2Y8 2422 aa10.01□□□□□ -0.81
HMGN1-202ENST00000380747 FAM186AA6NE01 2351 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 ZNF233A6NK53 670 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 TGFB1I1O43294 461 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 LILRB3O75022 631 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 RHOBTB3O94955 611 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 IL18RAPO95256 599 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 GLP2RO95838 553 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 ADRB2P07550 413 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 CNPP09543 421 aaKnown RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 RPL17P18621 184 aaKnown RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 CYP3A5P20815 502 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 FGFR3P22607 806 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 LRPAP1P30533 357 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 SNRPFP62306 86 aaKnown RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 ZXDAP98168 799 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 TFAMQ00059 246 aaKnown RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 POU5F1Q01860 360 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms