RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 LRIG3Q6UXM1 1119 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 PHF13Q86YI8 300 aaPredicted RBP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 RHPN2Q8IUC4 686 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 LRRC71Q8N4P6 559 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 OR5B17Q8NGF7 314 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 PPTC7Q8NI37 304 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ANKRD36BP1Q96IX9 119 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM129AQ9BZQ8 928 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 NIF3L1Q9GZT8 377 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM204AQ9H8W3 233 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 AMACRQ9UHK6 382 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 NUB1Q9Y5A7 615 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ZNF236Q9UL36 1845 aa11.17□□□□□ -0.62
POLR2J3-201ENST00000379340 ANK1P16157 1881 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 A6NNZ2 444 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 PDHXO00330 501 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 PODXLO00592 558 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TTI1O43156 1089 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ERLIN2O94905 339 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 LSM8O95777 96 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 LGALS2P05162 132 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TMEM191BP0C7N4 346 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ECHS1P30084 290 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 NOMO3P69849 1222 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 DR1Q01658 176 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 MBTD1Q05BQ5 628 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 PTP4A2Q12974 167 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TRPC3Q13507 836 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 CYP1B1Q16678 543 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TUBB8Q3ZCM7 444 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ZNF568Q3ZCX4 644 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 SPOPLQ6IQ16 392 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TAPT1Q6NXT6 567 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TMEM270Q6UE05 265 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 MON1BQ7L1V2 547 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM76AQ8TAV0 307 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 KRT35Q92764 455 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 COPS5Q92905 334 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 LRCH3Q96II8 777 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 HINFPQ9BQA5 517 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 PARP2Q9UGN5 583 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 PCYOX1Q9UHG3 505 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ANAPC7Q9UJX3 599 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 CCL15-CCL14A0A0B4J2E2 113 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 GOLGA6CA6NDK9 693 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 INO80B-WBP1J3KQ70 363 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 MYO1FO00160 1098 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 THAP12O43422 761 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 HOXC6P09630 235 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM153BP0C7A2 387 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 GOLGA6DP0CG33 693 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 CYP2C8P10632 490 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 MCF2P10911 925 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TMOD1P28289 359 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ADORA2AP29274 412 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 CTGFP29279 349 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 MAN1A1P33908 653 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TNFSF9P41273 254 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 FNTAP49354 379 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 IRF5Q13568 498 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TAF1CQ15572 869 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 CCL15Q16663 113 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 TMEM132AQ24JP5 1023 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM153CQ494X1 144 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 NAA35Q5VZE5 725 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 SLC13A5Q86YT5 568 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 LINC01465Q8N7H1 131 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 DPF3Q92784 378 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ZIM3Q96PE6 472 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ERP44Q9BS26 406 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 INO80BQ9C086 356 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 ZNF518BQ9C0D4 1074 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 PDGFCQ9NRA1 345 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 GOLGA6AQ9NYA3 693 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
POLR2J3-201ENST00000379340 A0A0C4DFX4 3053 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 BTBD19C9JJ37 291 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 PSTPIP1O43586 416 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 ZEB2O60315 1214 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 PROSCO94903 275 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 CALB1P05937 261 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 INSRRP14616 1297 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 RRM1P23921 792 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 LMAN1P49257 510 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 CLCN3P51790 818 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 GUCY2FP51841 1108 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 MROH7Q68CQ1 1323 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 DUPD1Q68J44 220 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 PLEKHA7Q6IQ23 1121 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 UBE2Q1Q7Z7E8 422 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 JAMLQ86YT9 394 aa11.15□□□□□ -0.62
POLR2J3-201ENST00000379340 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms