RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 FSCN2O14926 492 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 PPFIA2O75334 1257 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 INSRRP14616 1297 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 BRD2P25440 801 aaKnown RBP23.1■■□□□ 1.29
RNF39-202ENST00000376751 KCNJ1P48048 391 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 SCARA5Q6ZMJ2 495 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 XYLT2Q9H1B5 865 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 TMBIM4Q9HC24 238 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 CISHQ9NSE2 258 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 PNMA3Q9UL41 463 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 MTUS1Q9ULD2 1270 aa23.1■■□□□ 1.29
RNF39-202ENST00000376751 CSDE1O75534 798 aaKnown RBP23.09■■□□□ 1.29
RNF39-202ENST00000376751 SLC1A1P43005 524 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 DRG2P55039 364 aaKnown RBP23.09■■□□□ 1.29
RNF39-202ENST00000376751 C1QBPQ07021 282 aaKnown RBP23.09■■□□□ 1.29
RNF39-202ENST00000376751 SURF1Q15526 300 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 FOXR1Q6PIV2 292 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 ATP6V1G3Q96LB4 118 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 PPP1R16BQ96T49 567 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 ZNF408Q9H9D4 720 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 PDHXO00330 501 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 MEFVO15553 781 aaPredicted RBP23.09■■□□□ 1.29
RNF39-202ENST00000376751 POTEJP0CG39 1038 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 CXCL8P10145 99 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 ASPAP45381 313 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 TAS2R40P59535 323 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 SKOR1P84550 965 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 MKRN3Q13064 507 aaKnown RBP23.09■■□□□ 1.29
RNF39-202ENST00000376751 MTMR3Q13615 1198 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 TMEM132AQ24JP5 1023 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 LINC01465Q8N7H1 131 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 C1orf131Q8NDD1 294 aaKnown RBP23.09■■□□□ 1.29
RNF39-202ENST00000376751 FBXO25Q8TCJ0 367 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 VCPIP1Q96JH7 1222 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 IFT122Q9HBG6 1241 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 LRRC4CQ9HCJ2 640 aa23.09■■□□□ 1.29
RNF39-202ENST00000376751 GPR25O00155 361 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 B4GALT4O60513 344 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 WEE2P0C1S8 567 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 TMEM191BP0C7N4 346 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 ZNF286BP0CG31 522 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 PLTPP55058 493 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 TRPC3Q13507 836 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 SGSM1Q2NKQ1 1148 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 ZNF699Q32M78 642 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 ZNF394Q53GI3 561 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 C1orf54Q8WWF1 131 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 MS4A4AQ96JQ5 239 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 KATNBL1Q9H079 304 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 EPB41L4BQ9H329 900 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 POLIQ9UNA4 740 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 TNFSF13BQ9Y275 285 aa23.08■■□□□ 1.29
RNF39-202ENST00000376751 GRIN2DO15399 1336 aa23.08■■□□□ 1.28
RNF39-202ENST00000376751 GLTPD2A6NH11 291 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 BTBD19C9JJ37 291 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 MMP8P22894 467 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 FNTAP49354 379 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 LAMC2Q13753 1193 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 ZNF484Q5JVG2 852 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 TTC19Q6DKK2 380 aaPredicted RBP23.07■■□□□ 1.28
RNF39-202ENST00000376751 CCDC105Q8IYK2 499 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 AFG1LQ8WV93 481 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 TFAP2BQ92481 460 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 CAPS2Q9BXY5 557 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 LRRC19Q9H756 370 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 ATP8A1Q9Y2Q0 1164 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 PTPN22Q9Y2R2 807 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 GH1P01241 217 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 IRAK1P51617 712 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 AMHR2Q16671 573 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 GTF3C2Q8WUA4 911 aaPredicted RBP23.07■■□□□ 1.28
RNF39-202ENST00000376751 VTA1Q9NP79 307 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 SIX4Q9UIU6 781 aa23.07■■□□□ 1.28
RNF39-202ENST00000376751 ASAP2O43150 1006 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 NFICP08651 508 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 ADCYAP1R1P41586 468 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 ATP1A2P50993 1020 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 KDM7AQ6ZMT4 941 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 ATG4AQ8WYN0 398 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 NFKBIZQ9BYH8 718 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 MRPL47Q9HD33 250 aaKnown RBP23.06■■□□□ 1.28
RNF39-202ENST00000376751 CHST7Q9NS84 486 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 CALCOCO1Q9P1Z2 691 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 SCINQ9Y6U3 715 aa23.06■■□□□ 1.28
RNF39-202ENST00000376751 A0A087WZ62 844 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 RBM47A0AV96 593 aaKnown RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 PODXLO00592 558 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 TNNC2P02585 160 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 GNGT1P63211 74 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 CCNA1P78396 465 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 SGO2Q562F6 1265 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 PPTC7Q8NI37 304 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 BRI3BPQ8WY22 251 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 ANKRD36BP1Q96IX9 119 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 FDXACB1Q9BRP7 624 aaPredicted RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 R3HDM2Q9Y2K5 976 aaKnown RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 TCRBV5S1A1TA0A578 114 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 HMGB1P1B2RPK0 211 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms