RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PRG3Q9Y2Y8 225 aaPredicted RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 GRAP2O75791 330 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 RPS6P62753 249 aaKnown RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 MFN1Q8IWA4 741 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 OSBPL9Q96SU4 736 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 PKD2L2Q9NZM6 624 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 GSNP06396 782 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 HMOX2P30519 316 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 SEZ6Q53EL9 994 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 SHC4Q6S5L8 630 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 CLEC4FQ8N1N0 589 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 SLC30A5Q8TAD4 765 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 USP33Q8TEY7 942 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 USE1Q9NZ43 259 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 PFASO15067 1338 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 WDR19Q8NEZ3 1342 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 MIF4GDA9UHW6 222 aaKnown RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 CPT1AP50416 773 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 EFNA5P52803 228 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 NFIAQ12857 509 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 NBPF12Q5TAG4 269 aaPredicted RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 IZUMO3Q5VZ72 239 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 AGBL3Q8NEM8 1001 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 OPTNQ96CV9 577 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 ZNF512Q96ME7 567 aaPredicted RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 IP6K2Q9UHH9 426 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 DEAF1O75398 565 aaPredicted RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 SLC25A27O95847 323 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 CAPZA2P47755 286 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 TKFCQ3LXA3 575 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 FBXO16Q8IX29 292 aaPredicted RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 ZNF579Q8NAF0 562 aaKnown RBP15.03■□□□□ -0
TRAF1-201ENST00000373887 CPA5Q8WXQ8 436 aa15.03■□□□□ -0
TRAF1-201ENST00000373887 PVALEFA0A1B0GWK0 134 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 RASSF10A6NK89 507 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 LGALS16A8MUM7 142 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 TRAPPC3O43617 180 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 TERF2Q15554 542 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 CCDC137Q6PK04 289 aaKnown RBP15.02■□□□□ -0
TRAF1-201ENST00000373887 SLC16A10Q8TF71 515 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 ASAP2O43150 1006 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 S100A5P33763 92 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 NT5C2P49902 561 aa15.02■□□□□ -0
TRAF1-201ENST00000373887 L3MBTL3Q96JM7 780 aaPredicted RBP15.02■□□□□ -0
TRAF1-201ENST00000373887 GBA2Q9HCG7 927 aaPredicted RBP15.02■□□□□ -0
TRAF1-201ENST00000373887 BRD2P25440 801 aaKnown RBP15.02□□□□□ -0.01
TRAF1-201ENST00000373887 WASHC5Q12768 1159 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 GLRA4Q5JXX5 417 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 ZFP42Q96MM3 310 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 V9GYQ6 96 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 MED14O60244 1454 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 ATP2C1P98194 919 aaPredicted RBP15.02□□□□□ -0.01
TRAF1-201ENST00000373887 ZNF235Q14590 738 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 INPP5AQ14642 412 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 SYTL3Q4VX76 610 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 RABGAP1LQ5R372 815 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 ITPRIPL1Q6GPH6 555 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 PROM2Q8N271 834 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 PPP2R3CQ969Q6 453 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 CLMNQ96JQ2 1002 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 C17orf102A2RUQ5 167 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 BCAR1P56945 870 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 KRT17Q04695 432 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 MAPRE2Q15555 327 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 TRAF7Q6Q0C0 670 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 CDKL3Q8IVW4 592 aaPredicted RBP15.02□□□□□ -0.01
TRAF1-201ENST00000373887 IGDCC4Q8TDY8 1250 aa15.02□□□□□ -0.01
TRAF1-201ENST00000373887 STXBP3O00186 592 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 ENO3P13929 434 aaPredicted RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 TCN1P20061 433 aaPredicted RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 ARSEP51690 589 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 GUCY1A3Q02108 690 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 LZTS3O60299 673 aaPredicted RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 TBC1D4O60343 1298 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 DEFB128Q7Z7B8 93 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 SGMS1Q86VZ5 419 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 GALNT4Q8N4A0 578 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 GLT1D1Q96MS3 346 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 FBXO2Q9UK22 296 aaPredicted RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 TCP11X1B4DZS4 312 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 TLR2O60603 784 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 CCDC22O60826 627 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 LONP2Q86WA8 852 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 DCUN1D1Q96GG9 259 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 AGAP3Q96P47 875 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 MOV10L1Q9BXT6 1211 aaKnown RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 PLEKHA5Q9HAU0 1116 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 EXOSC4Q9NPD3 245 aaKnown RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 SATB2Q9UPW6 733 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 TEX33O43247 280 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 GUCA1CO95843 209 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 CYBBP04839 570 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 CDH6P55285 790 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 SESN2P58004 480 aaPredicted RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 PWP1Q13610 501 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 PDIA6Q15084 440 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 KHDRBS2Q5VWX1 349 aaKnown RBP15.01□□□□□ -0.01
TRAF1-201ENST00000373887 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 PID1Q7Z2X4 250 aa15.01□□□□□ -0.01
TRAF1-201ENST00000373887 ATP11CQ8NB49 1132 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms