RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SUFUQ9UMX1 484 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 GPD1P21695 349 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 FAM47EQ6ZV65 393 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 PTPRN2Q92932 1015 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 ATG4CQ96DT6 458 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 PABPC5Q96DU9 382 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 TMEM51Q9NW97 253 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 PHF2O75151 1096 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 MAGOHP61326 146 aaKnown RBP11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 AP2B1P63010 937 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 SPDYE7PQ495Y7 208 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 NFRKBQ6P4R8 1299 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 MMS22LQ6ZRQ5 1243 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 LATS2Q9NRM7 1088 aa11.64□□□□□ -0.55
PHACTR4-202ENST00000373839 ANGPT2O15123 496 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 HMGB3O15347 200 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 F9P00740 461 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 TFRCP02786 760 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 UCHL3P15374 230 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 GNL1P36915 607 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 ETFBP38117 255 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 NPEPPSP55786 919 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 RPL10AP62906 217 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 TTLL9Q3SXZ7 439 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 LMBRD2Q68DH5 695 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 NR1H4Q96RI1 486 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 UNC13BO14795 1591 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 UPP2O95045 317 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 TGS1Q96RS0 853 aaKnown RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 NDEL1Q9GZM8 345 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 ADA2Q9NZK5 511 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 IPPQ9Y573 584 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 RGL2O15211 777 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 CDH16O75309 829 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 AGTP01019 485 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 HDAC4P56524 1084 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 SESN2P58004 480 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 INPP5AQ14642 412 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 CYP4A22Q5TCH4 519 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 SEPT8Q92599 483 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 VPS33BQ9H267 617 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 POLD4Q9HCU8 107 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 KCNH7Q9NS40 1196 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 LMTK2Q8IWU2 1503 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 ANXA9O76027 345 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 TMEM253P0C7T8 217 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 CENPCQ03188 943 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 TAGAPQ8N103 731 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 C1orf54Q8WWF1 131 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 NEXMIFQ5QGS0 1516 aa11.63□□□□□ -0.55
PHACTR4-202ENST00000373839 GMNCA6NCL1 334 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 UGT3A1Q6NUS8 523 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 DHX40Q8IX18 779 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 VPS37AQ8NEZ2 397 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 MRPS31Q92665 395 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 SYN2Q92777 582 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 ATP6V1G3Q96LB4 118 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 MTFR1LQ9H019 292 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 ZC3H7BQ9UGR2 993 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 INTUQ9ULD6 942 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 LRRC7Q96NW7 1537 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 A0A1B0GTH6 734 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 A0A1W2PQJ5 194 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 ZNF263O14978 683 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 CAP2P40123 477 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 DPYDQ12882 1025 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 AARS2Q5JTZ9 985 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 HPDLQ96IR7 371 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 NAGPAQ9UK23 515 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 NCOA3Q9Y6Q9 1424 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 REREQ9P2R6 1566 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 PSMA3P25788 255 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 ILF2Q12905 390 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 BYSLQ13895 437 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 NCAPHQ15003 741 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 OPTNQ96CV9 577 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 PRPF18Q99633 342 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 EHD4Q9H223 541 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 PKP3Q9Y446 797 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 ZMYM2Q9UBW7 1377 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 RGS7P49802 495 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 VCPP55072 806 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 PDCLQ13371 301 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 NAB2Q15742 525 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 RABGAP1LQ5R372 815 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 PTRHD1Q6GMV3 140 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 ADCK2Q7Z695 626 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 ANLNQ9NQW6 1124 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 RIC8BQ9NVN3 520 aa11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 FAM32AQ9Y421 112 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.62□□□□□ -0.55
PHACTR4-202ENST00000373839 CFAP73A6NFT4 308 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms