RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 ARHGAP44Q17R89 818 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 SPOPLQ6IQ16 392 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 PDXDC1Q6P996 788 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 GJB7Q6PEY0 223 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 ZNF365Q70YC5 407 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 LRRC43Q8N309 656 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 TC2NQ8N9U0 490 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 BAP1Q92560 729 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 TATDN2Q93075 761 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 CASD1Q96PB1 797 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 PANX2Q96RD6 677 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 GOLGA2P5Q9HBQ8 144 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 APOBEC3GQ9HC16 384 aaKnown RBP16.11■□□□□ 0.17
YIPF3-202ENST00000372422 TBC1D13Q9NVG8 400 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 NXF1Q9UBU9 619 aaKnown RBP16.11■□□□□ 0.17
YIPF3-202ENST00000372422 NUB1Q9Y5A7 615 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 LTBP2Q14767 1821 aa16.11■□□□□ 0.17
YIPF3-202ENST00000372422 CASTOR2A6NHX0 329 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 LRRC53A6NM62 1247 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 TBKBP1A7MCY6 615 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 GTF2F1P35269 517 aaKnown RBP eCLIP16.1■□□□□ 0.17
YIPF3-202ENST00000372422 DRAP1Q14919 205 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-202ENST00000372422 TRIP11Q15643 1979 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 SFMBT2Q5VUG0 894 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 CCDC112Q8NEF3 446 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 SYN2Q92777 582 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-202ENST00000372422 DNAJC7Q99615 494 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 FAM124BQ9H5Z6 455 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-202ENST00000372422 KCND1Q9NSA2 647 aa16.1■□□□□ 0.17
YIPF3-202ENST00000372422 F8VZ95 297 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 DGKIO75912 1065 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 CLCNKBP51801 687 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 JAM2P57087 298 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 DEFB103AP81534 67 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 UPP1Q16831 310 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 TTC39CQ8N584 583 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 CYP3A43Q9HB55 503 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 ARHGEF37A1IGU5 675 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 KPNA7A9QM74 516 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 RNF225M0QZC1 329 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-202ENST00000372422 FERP16591 822 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 SOX5P35711 763 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 DSC1Q08554 894 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 ASIC2Q16515 512 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 DCLRE1AQ6PJP8 1040 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 C17orf53Q8N3J3 647 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-202ENST00000372422 HERVK_113Q902F9 699 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 KREMEN1Q96MU8 473 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 MMS19Q96T76 1030 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.09■□□□□ 0.172e-9■■■■□ 22.7
YIPF3-202ENST00000372422 AJAP1Q9UKB5 411 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-202ENST00000372422 SNX9Q9Y5X1 595 aa16.09■□□□□ 0.17
YIPF3-202ENST00000372422 CARNS1A5YM72 827 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 PPEF2O14830 753 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 RRP9O43818 475 aaKnown RBP16.08■□□□□ 0.16
YIPF3-202ENST00000372422 B3GAT3O94766 335 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 HNRNPH3P31942 346 aaKnown RBP16.08■□□□□ 0.16
YIPF3-202ENST00000372422 USP8P40818 1118 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 ASPAP45381 313 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 OR1G1P47890 313 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 GATMP50440 423 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 LILRA4P59901 499 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 SCARA3Q6AZY7 606 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 SCARA5Q6ZMJ2 495 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 MTERF4Q7Z6M4 381 aaKnown RBP16.08■□□□□ 0.16
YIPF3-202ENST00000372422 ZNF280BQ86YH2 543 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 TMEM130Q8N3G9 435 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 SHC3Q92529 594 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 KAT5Q92993 513 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 ELMO3Q96BJ8 720 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 SLC9A7Q96T83 725 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 BAG1Q99933 345 aaPredicted RBP16.08■□□□□ 0.16
YIPF3-202ENST00000372422 TMEM175Q9BSA9 504 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 BCO2Q9BYV7 579 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 DNAI2Q9GZS0 605 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 GDAP2Q9NXN4 497 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 AIPL1Q9NZN9 384 aa16.08■□□□□ 0.16
YIPF3-202ENST00000372422 TDRD15B5MCY1 1934 aaKnown RBP16.07■□□□□ 0.16
YIPF3-202ENST00000372422 HUS1O60921 280 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 DDHD2O94830 711 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 KRT5P13647 590 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 EPHB4P54760 987 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 CMTR2Q8IYT2 770 aaKnown RBP16.07■□□□□ 0.16
YIPF3-202ENST00000372422 PHOSPHO2Q8TCD6 241 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 YME1L1Q96TA2 773 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 ARID3AQ99856 593 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 COLEC11Q9BWP8 271 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 POLIQ9UNA4 740 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 PCDHB4Q9Y5E5 795 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 BZW2Q9Y6E2 419 aaKnown RBP16.07■□□□□ 0.16
YIPF3-202ENST00000372422 SLC4A7Q9Y6M7 1214 aa16.07■□□□□ 0.16
YIPF3-202ENST00000372422 MKI67P46013 3256 aaKnown RBP16.06■□□□□ 0.16
YIPF3-202ENST00000372422 TMEM189-UBE2V1I3L0A0 370 aa16.06■□□□□ 0.16
YIPF3-202ENST00000372422 FOXN3O00409 490 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms