RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 URGCPQ8TCY9 931 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.69
CCDC7-203ENST00000362006 BCO2Q9BYV7 579 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 HAUS4Q9H6D7 363 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 LRFN2Q9ULH4 789 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 TRIM43BA6NCK2 446 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 NDUFA10O95299 355 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 SCNN1GP51170 649 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 TNNC1P63316 161 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 MFSD5Q6N075 450 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 TRIM43Q96BQ3 446 aaPredicted RBP19.33■□□□□ 0.68
CCDC7-203ENST00000362006 UROC1Q96N76 676 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 KCND1Q9NSA2 647 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 MIOSQ9NXC5 875 aa19.33■□□□□ 0.68
CCDC7-203ENST00000362006 NXF1Q9UBU9 619 aaKnown RBP19.33■□□□□ 0.68
CCDC7-203ENST00000362006 TDRD15B5MCY1 1934 aaKnown RBP19.33■□□□□ 0.68
CCDC7-203ENST00000362006 ESPNB1AK53 854 aa19.32■□□□□ 0.68
CCDC7-203ENST00000362006 EIF3CLB5ME19 914 aaKnown RBP19.32■□□□□ 0.68
CCDC7-203ENST00000362006 AKR1B10O60218 316 aa19.32■□□□□ 0.68
CCDC7-203ENST00000362006 ACO1P21399 889 aaKnown RBP19.32■□□□□ 0.68
CCDC7-203ENST00000362006 ASPAP45381 313 aa19.32■□□□□ 0.68
CCDC7-203ENST00000362006 SOX4Q06945 474 aaPredicted RBP19.32■□□□□ 0.68
CCDC7-203ENST00000362006 NAB2Q15742 525 aa19.32■□□□□ 0.68
CCDC7-203ENST00000362006 SV2CQ496J9 727 aa19.32■□□□□ 0.68
CCDC7-203ENST00000362006 EIF3CQ99613 913 aaKnown RBP19.32■□□□□ 0.68
CCDC7-203ENST00000362006 PRKAG2Q9UGJ0 569 aa19.32■□□□□ 0.68
CCDC7-203ENST00000362006 PCDHB4Q9Y5E5 795 aa19.32■□□□□ 0.68
CCDC7-203ENST00000362006 ZSCAN12O43309 604 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 EFCAB14O75071 495 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 KRT5P13647 590 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 TAF6P49848 677 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 KRT83P78385 493 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 UBR7Q8N806 425 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 ELMO3Q96BJ8 720 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 ARID3AQ99856 593 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 RNF19AQ9NV58 838 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 TTC3P53804 2025 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 ABHD14A-ACY1A0A1B0GW23 586 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 PNMA6AP0CW24 399 aaPredicted RBP19.31■□□□□ 0.68
CCDC7-203ENST00000362006 IBSPP21815 317 aaPredicted RBP19.31■□□□□ 0.68
CCDC7-203ENST00000362006 CLCN1P35523 988 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 PTK2Q05397 1052 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 TUSC3Q13454 348 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 ASTE1Q2TB18 679 aaPredicted RBP19.31■□□□□ 0.68
CCDC7-203ENST00000362006 NOMO2Q5JPE7 1267 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 NPAS4Q8IUM7 802 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 GDAP2Q9NXN4 497 aa19.31■□□□□ 0.68
CCDC7-203ENST00000362006 SCN1AP35498 2009 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 CYP26A1O43174 497 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 LCA5LO95447 670 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 PLEKP08567 350 aaPredicted RBP19.3■□□□□ 0.68
CCDC7-203ENST00000362006 CCDC175P0C221 793 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 FAM163BP0C2L3 166 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 KIF11P52732 1056 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 BMS1Q14692 1282 aaKnown RBP19.3■□□□□ 0.68
CCDC7-203ENST00000362006 MTF1Q14872 753 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 SPA17Q15506 151 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 ABI1Q8IZP0 508 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 CISHQ9NSE2 258 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 POLIQ9UNA4 740 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 INPP5FQ9Y2H2 1132 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 MICAL3Q7RTP6 2002 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.3■□□□□ 0.68
CCDC7-203ENST00000362006 KPNA7A9QM74 516 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 TMEM270Q6UE05 265 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 ZNF571Q7Z3V5 609 aaPredicted RBP19.3■□□□□ 0.68
CCDC7-203ENST00000362006 ZNF677Q86XU0 584 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 LUC7LQ9NQ29 371 aaKnown RBP19.3■□□□□ 0.68
CCDC7-203ENST00000362006 ADGRG1Q9Y653 693 aa19.3■□□□□ 0.68
CCDC7-203ENST00000362006 POMCP01189 267 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 PDE6CP51160 858 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 AFF1P51825 1210 aaKnown RBP19.29■□□□□ 0.68
CCDC7-203ENST00000362006 SLC18A3Q16572 532 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 TCTN1Q2MV58 587 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 CLLU1OSQ5K130 101 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 TOGARAM2Q6ZUX3 1019 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 DPH6Q7L8W6 267 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 TXLNBQ8N3L3 684 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 MMS19Q96T76 1030 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 GOLGA2P5Q9HBQ8 144 aa19.29■□□□□ 0.68
CCDC7-203ENST00000362006 RBAK-RBAKDNI3L0D1 243 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 PODXLO00592 558 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 PPEF2O14830 753 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 WEE2P0C1S8 567 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 LILRA4P59901 499 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 C10orf76Q5T2E6 689 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 SCARA5Q6ZMJ2 495 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 CRIPAKQ8N1N5 446 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 RBBP8NLQ8NC74 664 aaPredicted RBP19.28■□□□□ 0.68
CCDC7-203ENST00000362006 AGPAT1Q99943 283 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.28■□□□□ 0.68
CCDC7-203ENST00000362006 DNAI2Q9GZS0 605 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 PPP2R2CQ9Y2T4 447 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 SNX9Q9Y5X1 595 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 GOLGA6L9A6NEM1 432 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 CSF2RAP15509 400 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 CYP11B1P15538 503 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 TNFAIP3P21580 790 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 ITGB8P26012 769 aa19.28■□□□□ 0.68
CCDC7-203ENST00000362006 ZNF132P52740 706 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms