RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 MGAT5BQ3V5L5 792 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 APOBEC3HQ6NTF7 200 aaKnown RBP14.16□□□□□ -0.14
LDB3-202ENST00000361373 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 GRAMD1AQ96CP6 724 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 OSBPL8Q9BZF1 889 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 HDAC6Q9UBN7 1215 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 PLAGL2Q9UPG8 496 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 VWA5AO00534 786 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 SMIM24O75264 130 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 UPP2O95045 317 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 SERPINB9P50453 376 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 NSUN2Q08J23 767 aaKnown RBP eCLIP14.16□□□□□ -0.14
LDB3-202ENST00000361373 CCDC15Q0P6D6 951 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 GIT2Q14161 759 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 HSP90AA5PQ58FG0 334 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 DCUN1D1Q96GG9 259 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 SEPT5Q99719 369 aaPredicted RBP14.16□□□□□ -0.14
LDB3-202ENST00000361373 FRMD8P1Q9BZ68 369 aaPredicted RBP14.16□□□□□ -0.14
LDB3-202ENST00000361373 CYP3A43Q9HB55 503 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 GAKO14976 1311 aa14.16□□□□□ -0.14
LDB3-202ENST00000361373 DDNO94850 711 aaPredicted RBP14.15□□□□□ -0.14
LDB3-202ENST00000361373 ITGB3P05106 788 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 VDRP11473 427 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 KLRC1P26715 233 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 ATICP31939 592 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 HARS2P49590 506 aaKnown RBP14.15□□□□□ -0.14
LDB3-202ENST00000361373 SEPT8Q92599 483 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 ALKBH8Q96BT7 664 aaKnown RBP14.15□□□□□ -0.14
LDB3-202ENST00000361373 TSPAN17Q96FV3 270 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 TMEM117Q9H0C3 514 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 AMACRQ9UHK6 382 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 SH3BP1Q9Y3L3 701 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 F9P00740 461 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 WEE2P0C1S8 567 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 ELAVL2Q12926 359 aaKnown RBP14.15□□□□□ -0.14
LDB3-202ENST00000361373 MTF1Q14872 753 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 KIF19Q2TAC6 998 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 ARHGAP15Q53QZ3 475 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 TAS2R42Q7RTR8 314 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 CGRRF1Q99675 332 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 ABHD16BQ9H3Z7 469 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 SPECC1L-ADORA2AF8WAN1 911 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 NFIBO00712 420 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 INHBEP58166 350 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 GOLGA7BQ2TAP0 167 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 DDX27Q96GQ7 796 aaKnown RBP14.15□□□□□ -0.14
LDB3-202ENST00000361373 TRPC7Q9HCX4 862 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 FAM49BQ9NUQ9 324 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 MAGOHP61326 146 aaKnown RBP14.15□□□□□ -0.14
LDB3-202ENST00000361373 TRADDQ15628 312 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 IMPG1Q17R60 797 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 CALML6Q8TD86 181 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 SCFD1Q8WVM8 642 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 SNX19Q92543 992 aa14.15□□□□□ -0.14
LDB3-202ENST00000361373 PPARGC1AQ9UBK2 798 aaKnown RBP14.15□□□□□ -0.14
LDB3-202ENST00000361373 OPHN1O60890 802 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 EGFRP00533 1210 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 GYPCP04921 128 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 VIL1P09327 827 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 POU5F1BQ06416 359 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 TDRD10Q5VZ19 366 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 ACAD10Q6JQN1 1059 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 COG1Q8WTW3 980 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 EGFL8Q99944 293 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 THEGQ9P2T0 379 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 ANGPTL2Q9UKU9 493 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 ZMYM2Q9UBW7 1377 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 H3BRB1 525 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 CCZ1BP86790 482 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 CCZ1P86791 482 aaPredicted RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 BYSLQ13895 437 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 TBCCQ15814 346 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 ZNF720Q7Z2F6 126 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 NUDCD3Q8IVD9 361 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 CENPKQ9BS16 269 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 TUT1Q9H6E5 874 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 GTSE1Q9NYZ3 720 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 PDHXO00330 501 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 MYO1DO94832 1006 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 PGK2P07205 417 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 RAB27AP51159 221 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 SESN3P58005 492 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 CACNB2Q08289 660 aaPredicted RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 PGM5Q15124 567 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 SKIV2LQ15477 1246 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 TAF2Q6P1X5 1199 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 FBXO16Q8IX29 292 aaPredicted RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 CCNYL1Q8N7R7 359 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 CDC26Q8NHZ8 85 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 NDE1Q9NXR1 346 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 SMG5Q9UPR3 1016 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 UBA6A0AVT1 1052 aaPredicted RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 PIK3R2O00459 728 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 MRPS25P82663 173 aaKnown RBP14.14□□□□□ -0.15
LDB3-202ENST00000361373 GRIN1Q05586 938 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 PKN1Q16512 942 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 VGLL2Q8N8G2 317 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 ATP6V1G3Q96LB4 118 aa14.14□□□□□ -0.15
LDB3-202ENST00000361373 TPX2Q9ULW0 747 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms