RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 CYP4A22Q5TCH4 519 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 SH3PXD2AQ5TCZ1 1133 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 TWF2Q6IBS0 349 aaKnown RBP3.07□□□□□ -1.92
LTN1-201ENST00000361371 MMS22LQ6ZRQ5 1243 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 GSPT2Q8IYD1 628 aaKnown RBP3.07□□□□□ -1.92
LTN1-201ENST00000361371 SECISBP2LQ93073 1101 aaKnown RBP3.07□□□□□ -1.92
LTN1-201ENST00000361371 ADAM2Q99965 735 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 MTG1Q9BT17 334 aaPredicted RBP3.07□□□□□ -1.92
LTN1-201ENST00000361371 UPF3AQ9H1J1 476 aaKnown RBP3.07□□□□□ -1.92
LTN1-201ENST00000361371 C10orf88Q9H8K7 445 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 ESYT3A0FGR9 886 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 TMEM110-MUSTN1A8MSY1 372 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 NT5C1B-RDH14C9J2C7 533 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 ZEB2O60315 1214 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 NOP2P46087 812 aaKnown RBP3.07□□□□□ -1.92
LTN1-201ENST00000361371 BCAR1P56945 870 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 NOMO3P69849 1222 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 MGAT3Q09327 533 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 KIF5AQ12840 1032 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 SPA17Q15506 151 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 PTGISQ16647 500 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 FBXO47Q5MNV8 452 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 SLFN12LQ6IEE8 588 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 KIF18AQ8NI77 898 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 FEZF2Q8TBJ5 459 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 PNKPQ96T60 521 aa3.07□□□□□ -1.92
LTN1-201ENST00000361371 CASTOR2A6NHX0 329 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 RPS6KA5O75582 802 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 AMHP03971 560 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CPT1AP50416 773 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CACNA2D1P54289 1103 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 NRLP54845 237 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TLE2Q04725 743 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ZNF252P-AS1Q0IIN9 211 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PTPN20Q4JDL3 420 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 ACOT1Q86TX2 421 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ARFGAP1Q8N6T3 406 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 SLC4A11Q8NBS3 891 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ZNF397Q8NF99 534 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 MYRIPQ8NFW9 859 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 SLC35G2Q8TBE7 412 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CLEC4CQ8WTT0 213 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TMEM174Q8WUU8 243 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 C2orf40Q9H1Z8 148 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 RPF1Q9H9Y2 349 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 KLHL11Q9NVR0 708 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 FBXL5Q9UKA1 691 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PSME4Q14997 1843 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PI4K2BG5E9Z4 385 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 RHOXF2BP0C7M4 288 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 FERP16591 822 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TKTP29401 623 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 PGFP49763 221 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 MFAP3P55082 362 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PSMC1P62191 440 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 GCNT1Q02742 428 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 MESDQ14696 234 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DUOXA2Q1HG44 320 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TSR1Q2NL82 804 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 FAM117BQ6P1L5 589 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 B4GALNT4Q76KP1 1039 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PRUNE1Q86TP1 453 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CREG2Q8IUH2 290 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 WDR49Q8IV35 697 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CCDC170Q8IYT3 715 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 KBTBD7Q8WVZ9 684 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 KCNN1Q92952 543 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ACAP3Q96P50 834 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 RHOXF2Q9BQY4 288 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 HMX1Q9NP08 348 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 C1orf112Q9NSG2 853 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CTTNBP2NLQ9P2B4 639 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DNAJB4Q9UDY4 337 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 Q9Y3F1 56 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PCDHB4Q9Y5E5 795 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 MRFAP1Q9Y605 127 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 RRN3P2A6NIE6 340 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 GOLGA8SH3BPF8 625 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PQBP1O60828 265 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 GRAP2O75791 330 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 BEST1O76090 585 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 UNGP13051 313 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 NDST1P52848 882 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CRYBB1P53674 252 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 CDR2Q01850 454 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 FAM187BQ17R55 369 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TMEM173Q86WV6 379 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 GLT1D1Q96MS3 346 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 SENP6Q9GZR1 1112 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 ERVK-5Q9HDB9 667 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 NOD1Q9Y239 953 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PRG3Q9Y2Y8 225 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 ALG6Q9Y672 507 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 F8VP50 259 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CYP1A1P04798 512 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 GJC1P36383 396 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ATXN1P54253 815 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 RAD23BP54727 409 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TAS2R40P59535 323 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms