RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 EIF4A3P38919 411 aaKnown RBP26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 GRIK3Q13003 919 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 TDRD12Q587J7 1177 aaKnown RBP26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 DEFB128Q7Z7B8 93 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 FAM124BQ9H5Z6 455 aaPredicted RBP26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 GOLGA2P5Q9HBQ8 144 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 ESPNB1AK53 854 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 NDUFA10O95299 355 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 ANXA13P27216 316 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 CLCN1P35523 988 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 PNPLA4P41247 253 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 PTK2Q05397 1052 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 CLLU1OSQ5K130 101 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 GLB1LQ6UWU2 654 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 TNS4Q8IZW8 715 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 CCDC42Q96M95 316 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 ZNF560Q96MR9 790 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 SYT11Q9BT88 431 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 PRDM5Q9NQX1 630 aaPredicted RBP26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 NXF1Q9UBU9 619 aaKnown RBP26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 POLIQ9UNA4 740 aa26.66■■□□□ 1.86
SHARPIN-201ENST00000359551 CLSTN1O94985 981 aa26.65■■□□□ 1.86
SHARPIN-201ENST00000359551 P4HA1P13674 534 aa26.65■■□□□ 1.86
SHARPIN-201ENST00000359551 CYLC1P35663 651 aaPredicted RBP26.65■■□□□ 1.86
SHARPIN-201ENST00000359551 MFSD5Q6N075 450 aa26.65■■□□□ 1.86
SHARPIN-201ENST00000359551 TOGARAM2Q6ZUX3 1019 aa26.65■■□□□ 1.86
SHARPIN-201ENST00000359551 CYP3A43Q9HB55 503 aa26.65■■□□□ 1.86
SHARPIN-201ENST00000359551 EIF3CLB5ME19 914 aaKnown RBP26.64■■□□□ 1.86
SHARPIN-201ENST00000359551 LCA5LO95447 670 aa26.64■■□□□ 1.86
SHARPIN-201ENST00000359551 RAG1P15918 1043 aa26.64■■□□□ 1.86
SHARPIN-201ENST00000359551 ZNF571Q7Z3V5 609 aaPredicted RBP26.64■■□□□ 1.86
SHARPIN-201ENST00000359551 EIF3CQ99613 913 aaKnown RBP26.64■■□□□ 1.86
SHARPIN-201ENST00000359551 FNDC1Q4ZHG4 1894 aaPredicted RBP26.64■■□□□ 1.86
SHARPIN-201ENST00000359551 CYP26A1O43174 497 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 IBSPP21815 317 aaPredicted RBP26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 MSNP26038 577 aaKnown RBP26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 USP8P40818 1118 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 KIF11P52732 1056 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 YWHAEP62258 255 aaKnown RBP26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 OLIG1Q8TAK6 271 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 CISHQ9NSE2 258 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 RNF216Q9NWF9 866 aaPredicted RBP26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 ADGRG1Q9Y653 693 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 POMCP01189 267 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 RPL9P32969 192 aaKnown RBP26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 ZNF132P52740 706 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 IKBKEQ14164 716 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 EPS8L1Q8TE68 723 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 SDCBP2Q9H190 292 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 GDAP2Q9NXN4 497 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 INPP5FQ9Y2H2 1132 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 PCDHB7Q9Y5E2 793 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 PCDHB4Q9Y5E5 795 aa26.63■■□□□ 1.85
SHARPIN-201ENST00000359551 WEE2P0C1S8 567 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 FGFR1P11362 822 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 KRT5P13647 590 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 TAF6P49848 677 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 TNNC1P63316 161 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 TUSC3Q13454 348 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 NOMO2Q5JPE7 1267 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 SCARA5Q6ZMJ2 495 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 TMEM199Q8N511 208 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 DESI2Q9BSY9 194 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 DEF6Q9H4E7 631 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 SMYD3Q9H7B4 428 aa26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 NOCTQ9UK39 431 aaKnown RBP26.62■■□□□ 1.85
SHARPIN-201ENST00000359551 AKR1B10O60218 316 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 PFKMP08237 780 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 CSF2RAP15509 400 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 SV2CQ496J9 727 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 TMEM270Q6UE05 265 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 NPAS4Q8IUM7 802 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 RSPH1Q8WYR4 309 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 KANSL3Q9P2N6 904 aa26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 REXO2Q9Y3B8 237 aaKnown RBP26.61■■□□□ 1.85
SHARPIN-201ENST00000359551 KPNA7A9QM74 516 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 SPTLC1O15269 473 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 CCDC175P0C221 793 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 CYP11B1P15538 503 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 BPIFB4P59827 614 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 LILRA4P59901 499 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 BMS1Q14692 1282 aaKnown RBP26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 SLC18A3Q16572 532 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 LIMS2Q7Z4I7 341 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 SLC47A2Q86VL8 602 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 CCAR2Q8N163 923 aaKnown RBP26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 TTC39CQ8N584 583 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 RBBP8NLQ8NC74 664 aaPredicted RBP26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 URGCPQ8TCY9 931 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 DDX27Q96GQ7 796 aaKnown RBP26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 UROC1Q96N76 676 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 SPTLC3Q9NUV7 552 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 PPP2R2CQ9Y2T4 447 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 ABHD14A-ACY1A0A1B0GW23 586 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 PODXLO00592 558 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 ZNF263O14978 683 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 HOXA2O43364 376 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 DSC1Q08554 894 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 INCA1Q0VD86 236 aa26.6■■□□□ 1.85
SHARPIN-201ENST00000359551 UPP1Q16831 310 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms