RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 CCDC63Q8NA47 563 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 LMBR1Q8WVP7 490 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 DHX38Q92620 1227 aaKnown RBP19.84■□□□□ 0.77
SNX11-201ENST00000359238 ZSWIM8A7E2V4 1837 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 CFAP73A6NFT4 308 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 B4GALT5O43286 388 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 MSCO60682 206 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 STRN3Q13033 797 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 KIAA0753Q2KHM9 967 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 DUSP28Q4G0W2 176 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 ERAP1Q9NZ08 941 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 STYXL1Q9Y6J8 313 aa19.84■□□□□ 0.77
SNX11-201ENST00000359238 AOC2O75106 756 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 INSRRP14616 1297 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 GARTP22102 1010 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 STAT1P42224 750 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 TM4SF4P48230 202 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 ERMARDQ5T6L9 678 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 BZW1Q7L1Q6 419 aaKnown RBP19.83■□□□□ 0.76
SNX11-201ENST00000359238 ZBTB33Q86T24 672 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 METTL13Q8N6R0 699 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 ANKS4BQ8N8V4 417 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 OR6J1Q8NGC5 347 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 PSPC1Q8WXF1 523 aaKnown RBP19.83■□□□□ 0.76
SNX11-201ENST00000359238 SPDL1Q96EA4 605 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 ARHGAP39Q9C0H5 1083 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 CCDC113Q9H0I3 377 aa19.83■□□□□ 0.76
SNX11-201ENST00000359238 SPATS2LQ9NUQ6 558 aaKnown RBP19.83■□□□□ 0.76
SNX11-201ENST00000359238 AGO2Q9UKV8 859 aaKnown RBP19.83■□□□□ 0.76
SNX11-201ENST00000359238 KLHL33A6NCF5 533 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 SKAP2O75563 359 aaPredicted RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 ANP32DO95626 131 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 MAGOHP61326 146 aaKnown RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 BIRC2Q13490 618 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 MAGOHBQ96A72 148 aaKnown RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 EMID1Q96A84 441 aaPredicted RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 NLRP4Q96MN2 994 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 XPO6Q96QU8 1125 aaKnown RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 C16orf70Q9BSU1 422 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 PACSIN2Q9UNF0 486 aaPredicted RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 ZNF236Q9UL36 1845 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 TOMM70O94826 608 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 SLC26A2P50443 739 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 DNA2P51530 1060 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 TNFAIP2Q03169 654 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 ITIH4Q14624 930 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 EFCAB12Q6NXP0 572 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 ALKBH5Q6P6C2 394 aaKnown RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 PPM1KQ8N3J5 372 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 SLC30A5Q8TAD4 765 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 USP6NLQ92738 828 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 THOC1Q96FV9 657 aaKnown RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 SH3GL3Q99963 347 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 FAM129AQ9BZQ8 928 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 SUCLA2Q9P2R7 463 aaPredicted RBP19.82■□□□□ 0.76
SNX11-201ENST00000359238 GJD2Q9UKL4 321 aa19.82■□□□□ 0.76
SNX11-201ENST00000359238 A0A0B4J269 797 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 CA12O43570 354 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 EXTL3O43909 919 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 FAM189A1O60320 539 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 C22orf31O95567 290 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 KRT39Q6A163 491 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 SPOPLQ6IQ16 392 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 HELQQ8TDG4 1101 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 U2AF1L4Q8WU68 220 aaKnown RBP19.81■□□□□ 0.76
SNX11-201ENST00000359238 UBLCP1Q8WVY7 318 aaPredicted RBP19.81■□□□□ 0.76
SNX11-201ENST00000359238 TMEM8AQ9HCN3 771 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 ASAP2O43150 1006 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 HBP1O60381 514 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 PIGRP01833 764 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 MMP3P08254 477 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 HOXC6P09630 235 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 PPARDQ03181 441 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 NBPF20Q3BBV1 942 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 OR5B17Q8NGF7 314 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 RNF217Q8TC41 542 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 TAF4BQ92750 862 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 TLCD1Q96CP7 247 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 MSTO1Q9BUK6 570 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 HOMER3Q9NSC5 361 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 COQ4Q9Y3A0 265 aa19.81■□□□□ 0.76
SNX11-201ENST00000359238 ABLIM1O14639 778 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 DYNC1LI2O43237 492 aaPredicted RBP19.8■□□□□ 0.76
SNX11-201ENST00000359238 SGPL1O95470 568 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 FERP16591 822 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 RGS2P41220 211 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 RNASE9P60153 205 aaKnown RBP19.8■□□□□ 0.76
SNX11-201ENST00000359238 PRPF4BQ13523 1007 aaKnown RBP19.8■□□□□ 0.76
SNX11-201ENST00000359238 ZNF268Q14587 947 aaPredicted RBP19.8■□□□□ 0.76
SNX11-201ENST00000359238 IER5Q5VY09 327 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 TDRD10Q5VZ19 366 aaKnown RBP19.8■□□□□ 0.76
SNX11-201ENST00000359238 OLFML2BQ68BL8 750 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 IQSEC1Q6DN90 963 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 C15orf39Q6ZRI6 1047 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 TCP11Q8WWU5 503 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 NEUROG2Q9H2A3 272 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 NOP53Q9NZM5 478 aaKnown RBP19.8■□□□□ 0.76
SNX11-201ENST00000359238 ANKRD33BA6NCL7 494 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 DCDC2CA8MYV0 355 aa19.8■□□□□ 0.76
SNX11-201ENST00000359238 VNN1O95497 513 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms