RNA–Protein interactions for RNA: ENST00000356942.9

GPM6B-203, Transcript of glycoprotein M6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPM6B, Length 1,830 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-203ENST00000356942 TOP1MTQ969P6 601 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 PPEF2O14830 753 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 FECHP22830 423 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 HNRNPH3P31942 346 aaKnown RBP13.78□□□□□ -0.2
GPM6B-203ENST00000356942 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
GPM6B-203ENST00000356942 TNNC1P63316 161 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 DEFB103AP81534 67 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
GPM6B-203ENST00000356942 UPP1Q16831 310 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 ARHGAP44Q17R89 818 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 SFMBT2Q5VUG0 894 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 FAM193BQ96PV7 902 aaPredicted RBP13.78□□□□□ -0.2
GPM6B-203ENST00000356942 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 GPR88Q9GZN0 384 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 ZNHIT6Q9NWK9 470 aaKnown RBP13.78□□□□□ -0.2
GPM6B-203ENST00000356942 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
GPM6B-203ENST00000356942 CASTOR2A6NHX0 329 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 TBKBP1A7MCY6 615 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 NRDCO43847 1150 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 DGKIO75912 1065 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 SOX5P35711 763 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 GATMP50440 423 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 CLCNKBP51801 687 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 ASIC2Q16515 512 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 MEA1Q16626 185 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 TMEM240Q5SV17 173 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 LRRC8AQ8IWT6 810 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 KAT5Q92993 513 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 ARID3AQ99856 593 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 GDAP2Q9NXN4 497 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 AIPL1Q9NZN9 384 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
GPM6B-203ENST00000356942 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 TSC2P49815 1807 aa13.77□□□□□ -0.21
GPM6B-203ENST00000356942 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 UPP2O95045 317 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 CCDC172P0C7W6 258 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 FERP16591 822 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 EPHB4P54760 987 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 SCARA5Q6ZMJ2 495 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 COLGALT2Q8IYK4 626 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 TTC39CQ8N584 583 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 UBR7Q8N806 425 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 HERVK_113Q902F9 699 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
GPM6B-203ENST00000356942 MTIF3Q9H2K0 278 aaKnown RBP13.76□□□□□ -0.21
GPM6B-203ENST00000356942 RC3H2Q9HBD1 1191 aaKnown RBP13.76□□□□□ -0.21
GPM6B-203ENST00000356942 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 KPNA7A9QM74 516 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 DDHD2O94830 711 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 AARSP49588 968 aaKnown RBP eCLIP13.76□□□□□ -0.21
GPM6B-203ENST00000356942 LILRA4P59901 499 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 CDK17Q00537 523 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 HS1BP3Q53T59 392 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 E4F1Q66K89 784 aaPredicted RBP13.76□□□□□ -0.21
GPM6B-203ENST00000356942 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
GPM6B-203ENST00000356942 ZNF689Q96CS4 500 aaPredicted RBP13.76□□□□□ -0.21
GPM6B-203ENST00000356942 TMEM175Q9BSA9 504 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 SNX9Q9Y5X1 595 aa13.76□□□□□ -0.21
GPM6B-203ENST00000356942 FOXN3O00409 490 aaPredicted RBP13.75□□□□□ -0.21
GPM6B-203ENST00000356942 SPTLC1O15269 473 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 B4GALT3O60512 393 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
GPM6B-203ENST00000356942 DCLRE1AQ6PJP8 1040 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 TRIM44Q96DX7 344 aaPredicted RBP13.75□□□□□ -0.21
GPM6B-203ENST00000356942 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 BAG1Q99933 345 aaPredicted RBP13.75□□□□□ -0.21
GPM6B-203ENST00000356942 SMYD3Q9H7B4 428 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 NRDE2Q9H7Z3 1164 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 CACNG4Q9UBN1 327 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 CNTN6Q9UQ52 1028 aa13.75□□□□□ -0.21
GPM6B-203ENST00000356942 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 MKI67P46013 3256 aaKnown RBP13.74□□□□□ -0.21
GPM6B-203ENST00000356942 ARHGEF37A1IGU5 675 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 GFPT2O94808 682 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 SERPING1P05155 500 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 PNMA6AP0CW24 399 aaPredicted RBP13.74□□□□□ -0.21
GPM6B-203ENST00000356942 KRT5P13647 590 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 PRKCIP41743 596 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 INCA1Q0VD86 236 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
GPM6B-203ENST00000356942 WDR59Q6PJI9 974 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 DPH6Q7L8W6 267 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 LIMS2Q7Z4I7 341 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 TMEM139Q8IV31 216 aa13.74□□□□□ -0.21
GPM6B-203ENST00000356942 TOP6BLQ8N6T0 577 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms