RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PCYOX1Q9UHG3 505 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.79■□□□□ 0.44
SAMM50-201ENST00000350028 PODXLO00592 558 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 KIF3CO14782 793 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 PROSCO94903 275 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 LSM8O95777 96 aaKnown RBP17.78■□□□□ 0.44
SAMM50-201ENST00000350028 CFHP08603 1231 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 PTGIRP43119 386 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 LMAN1P49257 510 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 PTP4A2Q12974 167 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 GRB14Q14449 540 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 ZNF699Q32M78 642 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 GPR142Q7Z601 462 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 PIK3R5Q8WYR1 880 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 ZBTB10Q96DT7 871 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 PARK7Q99497 189 aaKnown RBP17.78■□□□□ 0.44
SAMM50-201ENST00000350028 C16orf70Q9BSU1 422 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 CISHQ9NSE2 258 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 ANK1P16157 1881 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 A0A087WZ62 844 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 GOLGA6CA6NDK9 693 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 FSCN2O14926 492 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 ZEB2O60315 1214 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 GOLGA6DP0CG33 693 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 GBP1P32455 592 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
SAMM50-201ENST00000350028 MTMR3Q13615 1198 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 SCARA3Q6AZY7 606 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 LRIG3Q6UXM1 1119 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 PLEKHH3Q7Z736 793 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 JAMLQ86YT9 394 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 PASD1Q8IV76 773 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 C2orf69Q8N8R5 385 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 FAM76AQ8TAV0 307 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 FDXACB1Q9BRP7 624 aaPredicted RBP17.78■□□□□ 0.44
SAMM50-201ENST00000350028 TRIM51Q9BSJ1 452 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 ZNF518BQ9C0D4 1074 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 NEUROG2Q9H2A3 272 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 DPH5Q9H2P9 285 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 GOLGA6AQ9NYA3 693 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
SAMM50-201ENST00000350028 GPR25O00155 361 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 CALB1P05937 261 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 OSTNP61366 133 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 MAMLD1Q13495 774 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 AMHR2Q16671 573 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 DUSP28Q4G0W2 176 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 SPRYD7Q5W111 196 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 IQSEC1Q6DN90 963 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 MTHFD1LQ6UB35 978 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 MMS22LQ6ZRQ5 1243 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 CEP120Q8N960 986 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 C12orf50Q8NA57 414 aaPredicted RBP17.77■□□□□ 0.44
SAMM50-201ENST00000350028 C1orf131Q8NDD1 294 aaKnown RBP17.77■□□□□ 0.44
SAMM50-201ENST00000350028 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.77■□□□□ 0.44
SAMM50-201ENST00000350028 MAML3Q96JK9 1138 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 XYLT2Q9H1B5 865 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 PARVAQ9NVD7 372 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 LCMT1Q9UIC8 334 aa17.77■□□□□ 0.44
SAMM50-201ENST00000350028 H3BRB1 525 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 ERLIN2O94905 339 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 STAG3L1P0CL83 205 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 HOXD8P13378 290 aaPredicted RBP17.76■□□□□ 0.43
SAMM50-201ENST00000350028 MMP8P22894 467 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 FNTAP49354 379 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 FAM110CQ1W6H9 321 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 CDR2LQ86X02 465 aaPredicted RBP17.76■□□□□ 0.43
SAMM50-201ENST00000350028 ZDHHC14Q8IZN3 488 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 TMEM35BQ8NCS4 154 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 FEZF2Q8TBJ5 459 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 TUT1Q9H6E5 874 aaKnown RBP17.76■□□□□ 0.43
SAMM50-201ENST00000350028 GPBP1L1Q9HC44 474 aaPredicted RBP17.76■□□□□ 0.43
SAMM50-201ENST00000350028 PCDHGC3Q9UN70 934 aa17.76■□□□□ 0.43
SAMM50-201ENST00000350028 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.75■□□□□ 0.43
SAMM50-201ENST00000350028 PSTPIP1O43586 416 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 ZNF286BP0CG31 522 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 CXCL8P10145 99 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 RARAP10276 462 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 CD58P19256 250 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 MAN1A1P33908 653 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 COILP38432 576 aaPredicted RBP17.75■□□□□ 0.43
SAMM50-201ENST00000350028 SIX1Q15475 284 aaPredicted RBP17.75■□□□□ 0.43
SAMM50-201ENST00000350028 SPDYCQ5MJ68 293 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 CST9Q5W186 159 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 CCDC137Q6PK04 289 aaKnown RBP17.75■□□□□ 0.43
SAMM50-201ENST00000350028 PHLDB2Q86SQ0 1253 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 C18orf8Q96DM3 657 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 TINF2Q9BSI4 451 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 TRIM7Q9C029 511 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 PDZD7Q9H5P4 517 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 ASB7Q9H672 318 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 LRRC19Q9H756 370 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 SLC5A4Q9NY91 659 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 PARP2Q9UGN5 583 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 SLC15A5A6NIM6 579 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 LACTBL1A8MY62 500 aa17.75■□□□□ 0.43
SAMM50-201ENST00000350028 SMPD1P17405 629 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms