RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 DUPD1Q68J44 220 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 CD302Q8IX05 232 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 ZDHHC14Q8IZN3 488 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 C11orf70Q9BRQ4 267 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 TRIM51Q9BSJ1 452 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 C16orf70Q9BSU1 422 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 TRIM7Q9C029 511 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 MRPL47Q9HD33 250 aaKnown RBP21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 MTUS1Q9ULD2 1270 aa21.7■■□□□ 1.06
CHRNA3-202ENST00000348639 GOLGA6CA6NDK9 693 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 CSDE1O75534 798 aaKnown RBP21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 GOLGA6DP0CG33 693 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 PTP4A2Q12974 167 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 GRB14Q14449 540 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 C2CD6Q53TS8 623 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 PLEKHA7Q6IQ23 1121 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 CEP120Q8N960 986 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 MAGOHBQ96A72 148 aaKnown RBP21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 MAML3Q96JK9 1138 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 XYLT2Q9H1B5 865 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 RPF1Q9H9Y2 349 aaKnown RBP21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 CISHQ9NSE2 258 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 GOLGA6AQ9NYA3 693 aa21.69■■□□□ 1.06
CHRNA3-202ENST00000348639 DRG2P55039 364 aaKnown RBP21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 MAMLD1Q13495 774 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 ZNF699Q32M78 642 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 PLEKHH3Q7Z736 793 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 PHLDB2Q86SQ0 1253 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 JAMLQ86YT9 394 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 C18orf8Q96DM3 657 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 DPH5Q9H2P9 285 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 RASAL2Q9UJF2 1139 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 ZHX1Q9UKY1 873 aaPredicted RBP21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 AKT3Q9Y243 479 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 A0A087WZ62 844 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 GPR25O00155 361 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 PROSCO94903 275 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 TMOD1P28289 359 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 PTGIRP43119 386 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 AMHR2Q16671 573 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 FAM110CQ1W6H9 321 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 LLGL2Q6P1M3 1020 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 FAM76AQ8TAV0 307 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 RUNDC3BQ96NL0 473 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 FDXACB1Q9BRP7 624 aaPredicted RBP21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 SCINQ9Y6U3 715 aa21.68■■□□□ 1.06
CHRNA3-202ENST00000348639 CXCL8P10145 99 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 MCF2P10911 925 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 CD58P19256 250 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 SSTR3P32745 418 aaPredicted RBP21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 ASPAP45381 313 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 TNFAIP2Q03169 654 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 SIX1Q15475 284 aaPredicted RBP21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 MMS22LQ6ZRQ5 1243 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 TCRBV7S2A1N4TA0A589 114 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 H3BRB1 525 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 FSCN2O14926 492 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 LSM8O95777 96 aaKnown RBP21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 SMPD1P17405 629 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 MMP8P22894 467 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 MTHFD1LQ6UB35 978 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 TMEM192Q8IY95 271 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 TINF2Q9BSI4 451 aa21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 TUT1Q9H6E5 874 aaKnown RBP21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.67■■□□□ 1.06
CHRNA3-202ENST00000348639 PODXLO00592 558 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 VTNP04004 478 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 RARAP10276 462 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 HSD17B3P37058 310 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 DUSP28Q4G0W2 176 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 TTC27Q6P3X3 843 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 CCDC137Q6PK04 289 aaKnown RBP21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 C12orf50Q8NA57 414 aaPredicted RBP21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 NPLOC4Q8TAT6 608 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 ARL8AQ96BM9 186 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 TRIM31Q9BZY9 425 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 PARVAQ9NVD7 372 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 CPA4Q9UI42 421 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 ZSWIM8A7E2V4 1837 aa21.66■■□□□ 1.06
CHRNA3-202ENST00000348639 ERICH4A6NGS2 130 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 KRT14P02533 472 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 WEE2P0C1S8 567 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 STAG3L1P0CL83 205 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 HOXD8P13378 290 aaPredicted RBP21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 FLT3P36888 993 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 YWHAEP62258 255 aaKnown RBP21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 MTMR3Q13615 1198 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 ACVR2BQ13705 512 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 KCTD19Q17RG1 926 aaPredicted RBP21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 TTMPQ5BVD1 217 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 CST9Q5W186 159 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 LRIG3Q6UXM1 1119 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 ZMYND15Q9H091 742 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 PDZD7Q9H5P4 517 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 PLAAQ9Y263 795 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 ANK1P16157 1881 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 ZEB2O60315 1214 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 CAPN2P17655 700 aa21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 COILP38432 576 aaPredicted RBP21.65■■□□□ 1.06
CHRNA3-202ENST00000348639 FNTAP49354 379 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms