RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TMEM117Q9H0C3 514 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 COG5Q9UP83 839 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 TRIM33Q9UPN9 1127 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 TMEM120BA0PK00 339 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 LUC7L3O95232 432 aaKnown RBP19.97■□□□□ 0.79
PSPC1-201ENST00000338910 CCNB1P14635 433 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 ATP4AP20648 1035 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 CTNNA2P26232 953 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 SARNPP82979 210 aaKnown RBP19.97■□□□□ 0.79
PSPC1-201ENST00000338910 ATP11AP98196 1134 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 MAP2K1Q02750 393 aaPredicted RBP19.97■□□□□ 0.79
PSPC1-201ENST00000338910 Q3C1V9 767 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 SLC39A4Q6P5W5 647 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 VSTM1Q6UX27 236 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 MCPH1Q8NEM0 835 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 SPIRE2Q8WWL2 714 aa19.97■□□□□ 0.79
PSPC1-201ENST00000338910 SEPT11Q9NVA2 429 aaKnown RBP19.97■□□□□ 0.79
PSPC1-201ENST00000338910 SOWAHBA6NEL2 793 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 WFS1O76024 890 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 CREB1P16220 341 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 XKR3Q5GH77 459 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 EEPD1Q7L9B9 569 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 POMGNT1Q8WZA1 660 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 ARHGEF2Q92974 986 aaKnown RBP19.96■□□□□ 0.79
PSPC1-201ENST00000338910 ART4Q93070 314 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 RUNDC3BQ96NL0 473 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 ANKRD27Q96NW4 1050 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 THAP2Q9H0W7 228 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 POLR3FQ9H1D9 316 aaPredicted RBP19.96■□□□□ 0.79
PSPC1-201ENST00000338910 ZNF408Q9H9D4 720 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 C17orf75Q9HAS0 396 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 RBPJLQ9UBG7 517 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 USP20Q9Y2K6 914 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 SKIV2L2P42285 1042 aaKnown RBP19.96■□□□□ 0.79
PSPC1-201ENST00000338910 MXI1P50539 228 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 EPC2Q52LR7 807 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 RMDN2Q96LZ7 410 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 SH3GL3Q99963 347 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 ZNF302Q9NR11 478 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 CLEC11AQ9Y240 323 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 ALG6Q9Y672 507 aa19.96■□□□□ 0.79
PSPC1-201ENST00000338910 IQCA1LA6NCM1 817 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 GJA5P36382 358 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 CCDC137Q6PK04 289 aaKnown RBP19.95■□□□□ 0.78
PSPC1-201ENST00000338910 CKAP2Q8WWK9 683 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 KAT5Q92993 513 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 TMEM143Q96AN5 459 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 BICD1Q96G01 975 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 TAS2R14Q9NYV8 317 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 HNRNPDLO14979 420 aaKnown RBP19.95■□□□□ 0.78
PSPC1-201ENST00000338910 MAPK13O15264 365 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 P4HA2O15460 535 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 PGK2P07205 417 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 LINGO3P0C6S8 592 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 TNFAIP3P21580 790 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 ICAM3P32942 547 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 POLGP54098 1239 aaPredicted RBP19.95■□□□□ 0.78
PSPC1-201ENST00000338910 LONRF1Q17RB8 773 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 ANKLE1Q8NAG6 615 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 KRT35Q92764 455 aa19.95■□□□□ 0.78
PSPC1-201ENST00000338910 ANKRD62A6NC57 917 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 MAP1SQ66K74 1059 aaPredicted RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 PALB2Q86YC2 1186 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 PARD3BQ8TEW8 1205 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 MAFBQ9Y5Q3 323 aaPredicted RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 MIF4GDA9UHW6 222 aaKnown RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 MARCKSL1P49006 195 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 HADHBP55084 474 aaKnown RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 MGAT5Q09328 741 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 LDLRAD1Q5T700 205 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 GPAT2Q6NUI2 795 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 TRMT10CQ7L0Y3 403 aaKnown RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 FASTKD5Q7L8L6 764 aaKnown RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 EGFL6Q8IUX8 553 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 SEMA4DQ92854 862 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 ELMO3Q96BJ8 720 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 NAF1Q96HR8 494 aaKnown RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 SERPINB12Q96P63 405 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 TOPORSQ9NS56 1045 aaPredicted RBP19.94■□□□□ 0.78
PSPC1-201ENST00000338910 ZFATQ9P243 1243 aa19.94■□□□□ 0.78
PSPC1-201ENST00000338910 ENO4A6NNW6 628 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 UNC5CO95185 931 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 ATG7O95352 703 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 UBA1P22314 1058 aaKnown RBP19.93■□□□□ 0.78
PSPC1-201ENST00000338910 EMC2Q15006 297 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 TAF11Q15544 211 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 RNF43Q68DV7 783 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 CGB2Q6NT52 195 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 TAS1R3Q7RTX0 852 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 SLC20A1Q8WUM9 679 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 UTP4Q969X6 686 aaKnown RBP19.93■□□□□ 0.78
PSPC1-201ENST00000338910 FAM167BQ9BTA0 163 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 DLATP10515 647 aaKnown RBP19.93■□□□□ 0.78
PSPC1-201ENST00000338910 RFX1P22670 979 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 EDNRBP24530 442 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 BIRC2Q13490 618 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 KIF22Q14807 665 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 CYP1B1Q16678 543 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 C11orf63Q6NUN7 778 aa19.93■□□□□ 0.78
PSPC1-201ENST00000338910 PPM1KQ8N3J5 372 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms