RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 INSRRP14616 1297 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 GTF2A1P52655 376 aaPredicted RBP6.65□□□□□ -1.35
PRKDC-202ENST00000338368 TMEM132DQ14C87 1099 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 TRAPPC12Q8WVT3 735 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 RBM15Q96T37 977 aaKnown RBP eCLIP6.65□□□□□ -1.351e-6■□□□□ 9.2
PRKDC-202ENST00000338368 H3BQF6 201 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 CST8O60676 142 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 SASH3O75995 380 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 LRRC14Q15048 493 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 KATNAL1Q9BW62 490 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 HGSNATQ68CP4 663 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.65□□□□□ -1.356e-6■■■■□ 24.9
PRKDC-202ENST00000338368 ZNF606Q8WXB4 792 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 ADRB2P07550 413 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 RALAP11233 206 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 GARSP41250 739 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ROR1Q01973 937 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 RRP1BQ14684 758 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 STAT4Q14765 748 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 DGKDQ16760 1214 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 GEN1Q17RS7 908 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 TRMT10CQ7L0Y3 403 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 WDR49Q8IV35 697 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 STMN2Q93045 179 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ARHGEF26Q96DR7 871 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CHMP6Q96FZ7 201 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ASCC2Q9H1I8 757 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 SAT1P21673 171 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ARPP19P56211 112 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 TMEM161BQ8NDZ6 487 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 GDAP1Q8TB36 358 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ACSF2Q96CM8 615 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 HPDLQ96IR7 371 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF518BQ9C0D4 1074 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ORC1Q13415 861 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 HP1BP3Q5SSJ5 553 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 TTC25Q96NG3 672 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 NFASCO94856 1347 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 LOXHD1Q8IVV2 1947 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ITGA4P13612 1032 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 FECHP22830 423 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 C11orf63Q6NUN7 778 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 NOP9Q86U38 636 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ABRAQ8N0Z2 381 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 BCAS3Q9H6U6 928 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ACP6Q9NPH0 428 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CSDE1O75534 798 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 KIZQ2M2Z5 673 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 EFHC2Q5JST6 749 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 PLEKHH3Q7Z736 793 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 APPL2Q8NEU8 664 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF446Q9NWS9 450 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 RIPK3Q9Y572 518 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 NCKAP1LP55160 1127 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 FAM133BQ5BKY9 247 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CCDC62Q6P9F0 684 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 TRPM4Q8TD43 1214 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 TTYH3Q9C0H2 523 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CES2O00748 559 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 GLRA2P23416 452 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 LONRF1Q17RB8 773 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 HIBCHQ6NVY1 386 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 MCOLN2Q8IZK6 566 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 THEM5Q8N1Q8 247 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ARHGAP24Q8N264 748 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 AFG1LQ8WV93 481 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 METTL5Q9NRN9 209 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 NEU2Q9Y3R4 380 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 H3BRB1 525 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 STRNO43815 780 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 RPS6KA5O75582 802 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 STAG3L1P0CL83 205 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 GCLCP48506 637 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 TAF6P49848 677 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 KCNT1Q5JUK3 1230 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 HEATR6Q6AI08 1181 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 RAPH1Q70E73 1250 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ZC3H18Q86VM9 953 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ATP11CQ8NB49 1132 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 LNX1Q8TBB1 728 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 TUT1Q9H6E5 874 aaKnown RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ACKR2O00590 384 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ZNF263O14978 683 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CDH16O75309 829 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 PDGFRBP09619 1106 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CTSHP09668 335 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CLEC16AQ2KHT3 1053 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 AGBL2Q5U5Z8 902 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 SDCCAG8Q86SQ7 713 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 PDGFDQ9GZP0 370 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 CISHQ9NSE2 258 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 FAM49BQ9NUQ9 324 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ADAMTSL3P82987 1691 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 KLHL38Q2WGJ6 581 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ANKMY2Q8IV38 441 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ARL8AQ96BM9 186 aa6.64□□□□□ -1.35
PRKDC-202ENST00000338368 ACTR5Q9H9F9 607 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-202ENST00000338368 COL20A1Q9P218 1284 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms