RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 PPP2R5DQ14738 602 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 ENOX2Q16206 610 aaKnown RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 SNX30Q5VWJ9 437 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 C9orf57Q5W0N0 161 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 RALGPS2Q86X27 583 aaPredicted RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 BRSK2Q8IWQ3 736 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 CCDC26Q8TAB7 109 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 IRF7Q92985 503 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 ZNF560Q96MR9 790 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 PRG3Q9Y2Y8 225 aaPredicted RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 HES2Q9Y543 173 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 MYO16Q9Y6X6 1858 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 A0A0A0MRY4 1105 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 TRAK2O60296 914 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 PRPF40AO75400 957 aaKnown RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 YEATS4O95619 227 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 CENPBP07199 599 aaPredicted RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 RHOP08100 348 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 CDC25CP30307 473 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 PSMD2Q13200 908 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 SLC39A14Q15043 492 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 SV2CQ496J9 727 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 ARHGAP29Q52LW3 1261 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 CENPPQ6IPU0 288 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 PRSS55Q6UWB4 352 aaPredicted RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 C11orf74Q86VG3 221 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 KCNV2Q8TDN2 545 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 NKD2Q969F2 451 aaPredicted RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 ACCSQ96QU6 501 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 C7orf25Q9BPX7 421 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 ACBD6Q9BR61 282 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 PAAF1Q9BRP4 392 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 MKNK1Q9BUB5 465 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 TARS2Q9BW92 718 aaKnown RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 TTLL2Q9BWV7 592 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 IRX2Q9BZI1 471 aaPredicted RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 IL37Q9NZH6 218 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 EHD2Q9NZN4 543 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 ADAM12O43184 909 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 GFRA3O60609 400 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 HAPLN1P10915 354 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 OR1D2P34982 312 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 FOXR2Q6PJQ5 311 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CRELD2Q6UXH1 353 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 ZNF852Q6ZMS4 543 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 SLC9A9Q8IVB4 645 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CELF5Q8N6W0 485 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 ZNF507Q8TCN5 953 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CACTINQ8WUQ7 758 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 LARP4BQ92615 738 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 ZNF668Q96K58 619 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 SH2D3AQ9BRG2 576 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 REEP2Q9BRK0 252 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 LARP6Q9BRS8 491 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 BCO2Q9BYV7 579 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 GBP3Q9H0R5 595 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 RPF1Q9H9Y2 349 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 UXTQ9UBK9 157 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 PCDHB13Q9Y5F0 798 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 REV3LO60673 3130 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 LACTBL1A8MY62 500 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 TACC1O75410 805 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 SEC24AO95486 1093 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 LMNAP02545 664 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 LRG1P02750 347 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 WARSP23381 471 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 GNL2Q13823 731 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 E2F4Q16254 413 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 COBLL1Q53SF7 1204 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 FAM171BQ6P995 826 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CCDC73Q6ZRK6 1079 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 STXBP4Q6ZWJ1 553 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 DCP1BQ8IZD4 617 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 UIMC1Q96RL1 719 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 GTPBP4Q9BZE4 634 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 UPF2Q9HAU5 1272 aaKnown RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 PIDD1Q9HB75 910 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 ZNF334Q9HCZ1 680 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 KBTBD4Q9NVX7 518 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 DLL3Q9NYJ7 618 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 SMC3Q9UQE7 1217 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 PVALEFA0A1B0GWK0 134 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CASTOR2A6NHX0 329 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 EXTL3O43909 919 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CHRM1P11229 460 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 ATICP31939 592 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 DPP6P42658 865 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CCR3P51677 355 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 EPHB3P54753 998 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 LILRA4P59901 499 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 CFAP221Q4G0U5 840 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 LAIR1Q6GTX8 287 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 PARM1Q6UWI2 310 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 ELOA2Q8IYF1 753 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 SIX5Q8N196 739 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 SLC7A14Q8TBB6 771 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 LRRC15Q8TF66 581 aa6.93□□□□□ -1.3
USP16-201ENST00000334352 ZNF512Q96ME7 567 aaPredicted RBP6.93□□□□□ -1.3
USP16-201ENST00000334352 DNAJC25Q9H1X3 360 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms