RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PTPN7P35236 360 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 C18orf8Q96DM3 657 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 OSBPL1AQ9BXW6 950 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 CAB39Q9Y376 341 aaPredicted RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 MICAL3Q7RTP6 2002 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 C3orf70A6NLC5 250 aaPredicted RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 ASAP2O43150 1006 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 TBC1D4O60343 1298 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 PGK2P07205 417 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 EPHA10Q5JZY3 1008 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 OTOAQ7RTW8 1153 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 ZNF560Q96MR9 790 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 CCL15-CCL14A0A0B4J2E2 113 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 NCOA4Q13772 614 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 CCL15Q16663 113 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 ARHGAP17Q68EM7 881 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 COMMD2Q86X83 199 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 RNPEPQ9H4A4 650 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 PTPRHQ9HD43 1115 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 DDX56Q9NY93 547 aaKnown RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 SMARCAL1Q9NZC9 954 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 KRT8P05787 483 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 ITGB6P18564 788 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 HUNKP57058 714 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 UNKQ9C0B0 810 aaKnown RBP11.07□□□□□ -0.64
CLN8-201ENST00000331222 TMEM39BQ9GZU3 492 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 SH3GLB2Q9NR46 395 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 HACL1Q9UJ83 578 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 PRR12Q9ULL5 1215 aa11.07□□□□□ -0.64
CLN8-201ENST00000331222 TEX33O43247 280 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 RALBP11234 206 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 KLK7P49862 253 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 SNAPC2Q13487 334 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 HAUS6Q7Z4H7 955 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 C4orf33Q8N1A6 199 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 BLOC1S5Q8TDH9 187 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 SCFD1Q8WVM8 642 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 KLF6Q99612 283 aaPredicted RBP11.06□□□□□ -0.64
CLN8-201ENST00000331222 BBS2Q9BXC9 721 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 BCL2L14Q9BZR8 327 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 SFNP31947 248 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 BNIPLQ7Z465 357 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 OOSP2Q86WS3 158 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 MED8Q96G25 268 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 TRIM62Q9BVG3 475 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 WNT8AQ9H1J5 351 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 ZFYVE1Q9HBF4 777 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
CLN8-201ENST00000331222 TRIM10Q9UDY6 481 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 PCDHA10Q9Y5I2 948 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 SNX8Q9Y5X2 465 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 RASSF10A6NK89 507 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 CAND2O75155 1236 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 VTNP04004 478 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 PDGFRAP16234 1089 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 FAXCQ5TGI0 409 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 TRIM69Q86WT6 500 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 METP08581 1390 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 PTPRTO14522 1441 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 RPS7P62081 194 aaKnown RBP11.06□□□□□ -0.64
CLN8-201ENST00000331222 MAPRE1Q15691 268 aaKnown RBP11.06□□□□□ -0.64
CLN8-201ENST00000331222 SLC35G2Q8TBE7 412 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 CNBD2Q96M20 576 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 CDC42BPGQ6DT37 1551 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 ASB14A6NK59 587 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 ASS1P00966 412 aaKnown RBP11.06□□□□□ -0.64
CLN8-201ENST00000331222 ATP1A1P05023 1023 aaKnown RBP11.06□□□□□ -0.64
CLN8-201ENST00000331222 HDAC4P56524 1084 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 MED21Q13503 144 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 ETNK1Q9HBU6 452 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 CHMP2BQ9UQN3 213 aa11.06□□□□□ -0.64
CLN8-201ENST00000331222 TSC22D2O75157 780 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 RPS6KA4O75676 772 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 GSTM1P09488 218 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 MYL2P10916 166 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 ZFXP17010 805 aaPredicted RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 SH3BGRP55822 239 aaPredicted RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 FBXO38Q6PIJ6 1188 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 PHACTR4Q8IZ21 702 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 SGF29Q96ES7 293 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 CINPQ9BW66 212 aaPredicted RBP11.05□□□□□ -0.64
CLN8-201ENST00000331222 KCTD10Q9H3F6 313 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 BARHL2Q9NY43 387 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 RHOBTB1O94844 696 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 WNK4Q96J92 1243 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 AGPAT1Q99943 283 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 PCDH8O95206 1070 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 IGFBP4P22692 258 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 PGM1P36871 562 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 PPP2R2AP63151 447 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 GUCY1A3Q02108 690 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 NDE1Q9NXR1 346 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 MYO3BQ8WXR4 1341 aa11.05□□□□□ -0.64
CLN8-201ENST00000331222 MYO1CO00159 1063 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms