RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 TCF25Q9BQ70 676 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 MMTAG2Q9BU76 263 aaKnown RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 GSX2Q9BZM3 304 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 TRIM6Q9C030 488 aaPredicted RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 BHMT2Q9H2M3 363 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 ENTPD7Q9NQZ7 604 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 DDX19AQ9NUU7 478 aaKnown RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 CLEC1BQ9P126 229 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 ARHGAP28Q9P2N2 729 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 DPP7Q9UHL4 492 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 ODF2LQ9ULJ1 636 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 TDRD15B5MCY1 1934 aaKnown RBP6.96□□□□□ -1.29
SMG1-201ENST00000330588 C2orf71A6NGG8 1288 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 ARL5CA6NH57 179 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 ZC3H11AO75152 810 aaKnown RBP eCLIP6.96□□□□□ -1.29
SMG1-201ENST00000330588 CLSTN1O94985 981 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 ALDH2P05091 517 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 PRKCBP05771 671 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 ALADP13716 330 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 SLC11A1P49279 550 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 DMP1Q13316 513 aaPredicted RBP6.96□□□□□ -1.29
SMG1-201ENST00000330588 PRPF4BQ13523 1007 aaKnown RBP6.96□□□□□ -1.29
SMG1-201ENST00000330588 TMEM119Q4V9L6 283 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 MCTP1Q6DN14 999 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 ANKRD54Q6NXT1 300 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 ELMSAN1Q6PJG2 1045 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 C1orf186Q6ZWK4 172 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 TMC7Q7Z402 723 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 GJD3Q8N144 294 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 VPS52Q8N1B4 723 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 SYT2Q8N9I0 419 aaPredicted RBP6.96□□□□□ -1.29
SMG1-201ENST00000330588 DEPTORQ8TB45 409 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 MICAL1Q8TDZ2 1067 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 HDAC7Q8WUI4 952 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 LPPQ93052 612 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 SNX21Q969T3 373 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 NECTIN4Q96NY8 510 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 TSPAN18Q96SJ8 248 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 HERC2P3Q9BVR0 1158 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 TNFSF13BQ9Y275 285 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.29
SMG1-201ENST00000330588 CHD9Q3L8U1 2897 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 SOWAHDA6NJG2 315 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 MEIS3P2A8K0S8 358 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 LOC730098B7Z3J9 87 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 H3BQ06 376 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 TMEM189-UBE2V1I3L0A0 370 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 TNFRSF10BO14763 440 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 LINC01565O15544 149 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 DDHD2O94830 711 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 SOD2P04179 222 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 IL9P15248 144 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 AFF1P51825 1210 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 DLX2Q07687 328 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 ELAVL2Q12926 359 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 MAPK7Q13164 816 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 IL17AQ16552 155 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 ECM1Q16610 540 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 HERC4Q5GLZ8 1057 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 PRSS36Q5K4E3 855 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 COX20Q5RI15 118 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 ARTNQ5T4W7 220 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 PLPP4Q5VZY2 271 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 RINT1Q6NUQ1 792 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 PDXDC1Q6P996 788 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 RTL10Q7L3V2 364 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 GSTCDQ8NEC7 633 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 BSNDQ8WZ55 320 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 CPB2Q96IY4 423 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 RPS6KC1Q96S38 1066 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 COLEC11Q9BWP8 271 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 PHF7Q9BWX1 381 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 EMILIN2Q9BXX0 1053 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 EIF2AQ9BY44 585 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 CCSER1Q9C0I3 900 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 S1PR5Q9H228 398 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 NXF3Q9H4D5 531 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 ZSCAN16Q9H4T2 348 aaPredicted RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 PDZD7Q9H5P4 517 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 GPRC5CQ9NQ84 441 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMG1-201ENST00000330588 DNAJB12Q9NXW2 375 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 FNIP2Q9P278 1114 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 INPP5FQ9Y2H2 1132 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 TGFBR3LH3BV60 316 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 K7ERI5 159 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 NRP1O14786 923 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 B4GALT5O43286 388 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 CLASP2O75122 1294 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 HIP1RO75146 1068 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 NPTXRO95502 500 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 CXCL14O95715 111 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 ABL1P00519 1130 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 MCF2P10911 925 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 PLS3P13797 630 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 PROZP22891 400 aa6.95□□□□□ -1.3
SMG1-201ENST00000330588 GRNP28799 593 aaKnown RBP6.95□□□□□ -1.3
SMG1-201ENST00000330588 GTF2F1P35269 517 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMG1-201ENST00000330588 MLH1P40692 756 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms