RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 GLRA4Q5JXX5 417 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 PLPP4Q5VZY2 271 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 MPZL3Q6UWV2 235 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 ALKAL1Q6UXT8 129 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 CCAR2Q8N163 923 aaKnown RBP17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 MICAL1Q8TDZ2 1067 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 CPLX3Q8WVH0 158 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 SLC35C1Q96A29 364 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 ZMAT2Q96NC0 199 aaKnown RBP17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 TCHPQ9BT92 498 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 MMRN2Q9H8L6 949 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 HSPBP1Q9NZL4 362 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 ANKFY1Q9P2R3 1169 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 LZTS1Q9Y250 596 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 FAN1Q9Y2M0 1017 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 STYXL1Q9Y6J8 313 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 TOM1L1O75674 476 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 EFEMP2O95967 443 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 RFX1P22670 979 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 GRM5P41594 1212 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 OR1G1P47890 313 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 NRIP1P48552 1158 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 UBE3AQ05086 875 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 BFSP1Q12934 665 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 CTC1Q2NKJ3 1217 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 TIGD5Q53EQ6 642 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 CCDC170Q8IYT3 715 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 VN1R2Q8NFZ6 395 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 HLA-CQ95604 372 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 FBXL18Q96ME1 805 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 TCF25Q9BQ70 676 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 THEGQ9P2T0 379 aa17.73■□□□□ 0.43
PDLIM1-201ENST00000329399 FAM189A1O60320 539 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 MCF2P10911 925 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 GTF2H1P32780 548 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 PPM1AP35813 382 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 TNFSF9P41273 254 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 CYP2J2P51589 502 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 MCL1Q07820 350 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 EXOC3L4Q17RC7 722 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 ZPBP2Q6X784 338 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 CACNA2D4Q7Z3S7 1137 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 VPS52Q8N1B4 723 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 ZSWIM2Q8NEG5 633 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 TMC2Q8TDI7 906 aa17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 FAM193BQ96PV7 902 aaPredicted RBP17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 UBE2ZQ9H832 354 aaPredicted RBP17.72■□□□□ 0.43
PDLIM1-201ENST00000329399 TRIOO75962 3097 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 CASTOR2A6NHX0 329 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 H3BQ06 376 aaPredicted RBP17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 HNRNPDLO14979 420 aaKnown RBP17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 GLP2RO95838 553 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 KCNA5P22460 613 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 CASP4P49662 377 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 KRT17Q04695 432 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 SLC10A6Q3KNW5 377 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 XKR4Q5GH76 650 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 TCERG1LQ5VWI1 586 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 SMYD5Q6GMV2 418 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 TMC7Q7Z402 723 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 DDX53Q86TM3 631 aaKnown RBP17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 HACE1Q8IYU2 909 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 RSPH1Q8WYR4 309 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 TMEM169Q96HH4 297 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 B3GALT6Q96L58 329 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 ASB2Q96Q27 587 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 PPP1R10Q96QC0 940 aaKnown RBP17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 TMEM175Q9BSA9 504 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 GOLGA2P5Q9HBQ8 144 aa17.71■□□□□ 0.43
PDLIM1-201ENST00000329399 SMIM28A0A1B0GU29 152 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 C2orf71A6NGG8 1288 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 CLDN3O15551 220 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 CXCL14O95715 111 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 CCDC175P0C221 793 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 ADSSP30520 456 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 LIG4P49917 911 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 KCNMA1Q12791 1236 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 GRIK3Q13003 919 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 ADAM15Q13444 863 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 DCAF17Q5H9S7 520 aaPredicted RBP17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 CD300LGQ6UXG3 332 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 EP400NLQ6ZTU2 488 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 TXLNBQ8N3L3 684 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 MRPL43Q8N983 215 aaKnown RBP17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 POMGNT1Q8WZA1 660 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 BICD1Q96G01 975 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 GPR62Q9BZJ7 368 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 TLE6Q9H808 572 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 ENTPD7Q9NQZ7 604 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 CLDND1Q9NY35 253 aa17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 PUF60Q9UHX1 559 aaKnown RBP17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 TDRD15B5MCY1 1934 aaKnown RBP17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 TCF20Q9UGU0 1960 aaKnown RBP17.7■□□□□ 0.42
PDLIM1-201ENST00000329399 A0A0B4J269 797 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 TBX10O75333 385 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 THP07101 528 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 BMP1P13497 986 aa17.69■□□□□ 0.42
PDLIM1-201ENST00000329399 CYLC1P35663 651 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms