RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 PRG3Q9Y2Y8 225 aaPredicted RBP17.21■□□□□ 0.35
SMAD3-201ENST00000327367 SAC3D1A6NKF1 404 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 PCP4L1A6NKN8 68 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 FAM98CQ17RN3 349 aaKnown RBP17.21■□□□□ 0.35
SMAD3-201ENST00000327367 ACCSLQ4AC99 568 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 PTPRN2Q92932 1015 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 PNMA8BQ9ULN7 279 aaPredicted RBP17.21■□□□□ 0.35
SMAD3-201ENST00000327367 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 ZNF839A8K0R7 811 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 LDHAP00338 332 aaKnown RBP17.21■□□□□ 0.35
SMAD3-201ENST00000327367 KCNA6P17658 529 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 MTHFD1LQ6UB35 978 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 TSHZ1Q6ZSZ6 1077 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 ARHGEF38Q9NXL2 777 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.34
SMAD3-201ENST00000327367 PIPSLA2A3N6 862 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 hCG_1984214I3L0E3 225 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 TRIM24O15164 1050 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 PSMA4P25789 261 aaKnown RBP17.2■□□□□ 0.34
SMAD3-201ENST00000327367 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 TAF5Q15542 800 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 NEDD8Q15843 81 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 ZNF713Q8N859 430 aaPredicted RBP17.2■□□□□ 0.34
SMAD3-201ENST00000327367 ST13P5Q8NFI4 369 aaPredicted RBP17.2■□□□□ 0.34
SMAD3-201ENST00000327367 RMI1Q9H9A7 625 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 CD274Q9NZQ7 290 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 NUP107P57740 925 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 KLHL17Q6TDP4 642 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 NDUFAF2Q8N183 169 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 LRRC39Q96DD0 335 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 ASIC4Q96FT7 647 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 GINS4Q9BRT9 223 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 LY9Q9HBG7 655 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 KRT87PA6NCN2 255 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 TDP2O95551 362 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 NMT1P30419 496 aaKnown RBP17.2■□□□□ 0.34
SMAD3-201ENST00000327367 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
SMAD3-201ENST00000327367 CHSY1Q86X52 802 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 RCOR2Q8IZ40 523 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 BTBD7Q9P203 1132 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 SYDE1Q6ZW31 735 aaPredicted RBP17.2■□□□□ 0.34
SMAD3-201ENST00000327367 HDHD2Q9H0R4 259 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 SNPHO15079 494 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 RGS7P49802 495 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 SERPINB8P50452 374 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 NFIL3Q16649 462 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 CENPPQ6IPU0 288 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 CALML6Q8TD86 181 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 A2MP01023 1474 aa17.2■□□□□ 0.34
SMAD3-201ENST00000327367 COMTP21964 271 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 EZH2Q15910 746 aaKnown RBP17.19■□□□□ 0.34
SMAD3-201ENST00000327367 C19orf18Q8NEA5 215 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 CCSER1Q9C0I3 900 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 MRPL39Q9NYK5 338 aaKnown RBP17.19■□□□□ 0.34
SMAD3-201ENST00000327367 PVALEFA0A1B0GWK0 134 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 PSMD14O00487 310 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 GYPCP04921 128 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 ACAP1Q15027 740 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 SLC10A5Q5PT55 438 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 TCHHL1Q5QJ38 904 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-201ENST00000327367 MFN1Q8IWA4 741 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 GRAP2O75791 330 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 PHKG2P15735 406 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 ATP6V1B2P21281 511 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 SULT1E1P49888 294 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 PPIDQ08752 370 aaKnown RBP17.19■□□□□ 0.34
SMAD3-201ENST00000327367 SH3RF3Q8TEJ3 882 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-201ENST00000327367 IMPAD1Q9NX62 359 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 ALOX12P18054 663 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 MCAMP43121 646 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 SGSM1Q2NKQ1 1148 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 SYTL1Q8IYJ3 562 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 ERP44Q9BS26 406 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 TMEM120AQ9BXJ8 343 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 TMBIM4Q9HC24 238 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
SMAD3-201ENST00000327367 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 F8W8V4 182 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 PLEKP08567 350 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-201ENST00000327367 ATP12AP54707 1039 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 TRADDQ15628 312 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 CATSPER2Q96P56 530 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 ECSITQ9BQ95 431 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 RAD21L1Q9H4I0 556 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 GPR108Q9NPR9 543 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 SLC8A2Q9UPR5 921 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 PFASO15067 1338 aa17.19■□□□□ 0.34
SMAD3-201ENST00000327367 FAM205CA6NFA0 338 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 PSMB9P28065 219 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 ALDH6A1Q02252 535 aaKnown RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 GJB7Q6PEY0 223 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 NYAP1Q6ZVC0 841 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 CLVS1Q8IUQ0 354 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 FAM25AB3EWG3 89 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms