RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 USP30Q70CQ3 517 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 CPXCR1Q8N123 301 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 MSLNLQ96KJ4 702 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 SCLT1Q96NL6 688 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 TMEM168Q9H0V1 697 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 MRPS18AQ9NVS2 196 aaKnown RBP4.84□□□□□ -1.64
SMCO3-201ENST00000316048 NTMQ9P121 344 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 TBC1D30Q9Y2I9 924 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 ARHGAP5Q13017 1502 aa4.84□□□□□ -1.64
SMCO3-201ENST00000316048 PLCH2O75038 1416 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 KIAA1107Q9UPP5 1409 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMCO3-201ENST00000316048 KDM6BO15054 1643 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 ZCCHC11Q5TAX3 1644 aaKnown RBP4.83□□□□□ -1.64
SMCO3-201ENST00000316048 PREX2Q70Z35 1606 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 CXorf49A8MYA2 514 aaPredicted RBP4.83□□□□□ -1.64
SMCO3-201ENST00000316048 BTN3A1O00481 513 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 FFAR3O14843 346 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 MTSS1O43312 755 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 ABHD16AO95870 558 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 FTH1P19P0C7X4 201 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 IL2RBP14784 551 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 PDIA3P30101 505 aaKnown RBP4.83□□□□□ -1.64
SMCO3-201ENST00000316048 APBA1Q02410 837 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 GALNT1Q10472 559 aaPredicted RBP4.83□□□□□ -1.64
SMCO3-201ENST00000316048 SP140Q13342 867 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 RRAGBQ5VZM2 374 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 ADGRE4PQ86SQ3 457 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 MICU3Q86XE3 530 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 XYLT1Q86Y38 959 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 REXO1L1PQ8IX06 675 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 FBXO15Q8NCQ5 510 aaPredicted RBP4.83□□□□□ -1.64
SMCO3-201ENST00000316048 ATXN2LQ8WWM7 1075 aaKnown RBP4.83□□□□□ -1.64
SMCO3-201ENST00000316048 CFHR4Q92496 578 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 MBD6Q96DN6 1003 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 MRI1Q9BV20 369 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 SELENOOQ9BVL4 669 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 TTLL2Q9BWV7 592 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 ENKD1Q9H0I2 346 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 ADAM29Q9UKF5 820 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 MED16Q9Y2X0 877 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 MBD5Q9P267 1494 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 CROCC2H7BZ55 1655 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 PNPLA7Q6ZV29 1317 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 CDC42BPBQ9Y5S2 1711 aa4.83□□□□□ -1.64
SMCO3-201ENST00000316048 hCG_1642624A0A1W2PR95 340 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 MATN2O00339 956 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 JUNP05412 331 aaKnown RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 IL1R1P14778 569 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 FGFR2P21802 821 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 RAP2BP61225 183 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 PSMC1P62191 440 aaKnown RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 DUSP8Q13202 625 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 CTBP1Q13363 440 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 STARD3Q14849 445 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 PUM3Q15397 648 aaKnown RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 VMACQ2NL98 169 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 ARL13BQ3SXY8 428 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 ZNF529Q6P280 563 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 CCT6BQ92526 530 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 BRIP1Q9BX63 1249 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 FBXO34Q9NWN3 711 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 PNMA2Q9UL42 364 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 PADI4Q9UM07 663 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 MAGED2Q9UNF1 606 aaPredicted RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 AGAP1Q9UPQ3 857 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 CCDC141Q6ZP82 1450 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 MYO5CQ9NQX4 1742 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 NUP155O75694 1391 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 ANKRD30BQ9BXX2 1392 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 TRIM43BA6NCK2 446 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 DNAJB5O75953 348 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 KRT1P04264 644 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 CENPBP07199 599 aaPredicted RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 JUNBP17275 347 aaPredicted RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 RPL17P18621 184 aaKnown RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 CREMQ03060 361 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 PABPC1LQ4VXU2 614 aaKnown RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 CCDC38Q502W7 563 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 DACT2Q5SW24 774 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 EMC10Q5UCC4 262 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 FRMD5Q7Z6J6 570 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 OR6B3Q8NGW1 331 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 KBTBD7Q8WVZ9 684 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 TRIM43Q96BQ3 446 aaPredicted RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 NMD3Q96D46 503 aaKnown RBP4.82□□□□□ -1.64
SMCO3-201ENST00000316048 NDC1Q9BTX1 674 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 DPH1Q9BZG8 443 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 MOCS1Q9NZB8 636 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 GRHPRQ9UBQ7 328 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 DGKBQ9Y6T7 804 aa4.82□□□□□ -1.64
SMCO3-201ENST00000316048 SAMD9LQ8IVG5 1584 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 KIF15Q9NS87 1388 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 WDHD1O75717 1129 aaPredicted RBP4.81□□□□□ -1.64
SMCO3-201ENST00000316048 UNC5CO95185 931 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 GJB1P08034 283 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 ATP5JP18859 108 aa4.81□□□□□ -1.64
SMCO3-201ENST00000316048 TECP42680 631 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms