RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CYGBQ8WWM9 190 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.61□□□□□ -1.031e-6■■■■□ 20.6
VPS41-202ENST00000310301 EDEM3Q9BZQ6 932 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 CYP2C8P10632 490 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 GPS1Q13098 491 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 DNAL1Q4LDG9 190 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 IQSEC1Q6DN90 963 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 PPP4R3CPQ6ZMV5 832 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 ZNF555Q8NEP9 628 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 GMCL1Q96IK5 515 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 XPO6Q96QU8 1125 aaKnown RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 SH3GL1Q99961 368 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 NEUROG2Q9H2A3 272 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 HACD3Q9P035 362 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 DDTLA6NHG4 134 aaPredicted RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 CCT8L1PA6NM43 557 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 PAMP19021 973 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 MAPK6Q16659 721 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 CEP78Q5JTW2 689 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 ERICH1Q86X53 443 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 TAGAPQ8N103 731 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 GAS2L1Q99501 681 aaPredicted RBP8.61□□□□□ -1.03
VPS41-202ENST00000310301 CCDC134Q9H6E4 229 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 AMACRQ9UHK6 382 aa8.61□□□□□ -1.03
VPS41-202ENST00000310301 ASAP2O43150 1006 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 NBNO60934 754 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 TRIM16LQ309B1 348 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 CYB5D1Q6P9G0 228 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 FMR1NBQ8N0W7 255 aaPredicted RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 PARD3BQ8TEW8 1205 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 SNX19Q92543 992 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 EME1Q96AY2 570 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 ASPSCR1Q9BZE9 553 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 CARD9Q9H257 536 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 TLL2Q9Y6L7 1015 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 MON2Q7Z3U7 1717 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 POTEB3A0JP26 581 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 MAGEA13PA6NCF6 341 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 ZNF18P17022 549 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PRCPP42785 496 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 USP11P51784 963 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PRELPP51888 382 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DEFA1P59665 94 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DEFA3P59666 94 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PSMC5P62195 406 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 TFAMQ00059 246 aaKnown RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 MAP3K10Q02779 954 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 TRIP10Q15642 601 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 POTEBQ6S5H4 581 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DSTYKQ6XUX3 929 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 ERP27Q96DN0 273 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PPP1R36Q96LQ0 422 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 THTPAQ9BU02 230 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 TEX12Q9BXU0 123 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 SENP6Q9GZR1 1112 aaPredicted RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 TRABDQ9H4I3 376 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 CNGB3Q9NQW8 809 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 STMN3Q9NZ72 180 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PDP2Q9P2J9 529 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 NHSL1Q5SYE7 1610 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 RIC1Q4ADV7 1423 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 GOLGA8IPA6NC78 632 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 TMEM247A6NEH6 219 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 GOLGA8JA6NMD2 632 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PRR23D1E9PI22 279 aaPredicted RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 AKAP10O43572 662 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 HBP1O60381 514 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 EFCAB14O75071 495 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 RPS6KA5O75582 802 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 SNUPNO95149 360 aaKnown RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 AMHP03971 560 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PRR23D2P0DMB1 279 aaPredicted RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 ADORA2AP29274 412 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 GNL1P36915 607 aaPredicted RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 VHLP40337 213 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 INPP5AQ14642 412 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 GLB1LQ6UWU2 654 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 SCARA5Q6ZMJ2 495 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 YAF2Q8IY57 180 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DDHD1Q8NEL9 900 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 MS4A14Q96JA4 679 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 MAP3K14Q99558 947 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PARVGQ9HBI0 331 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DBR1Q9UK59 544 aaKnown RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 GAKO14976 1311 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 A0A1B0GW55 424 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 TTC26A0AVF1 554 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 K7ERI5 159 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 SNX2O60749 519 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 PQBP1O60828 265 aaKnown RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
VPS41-202ENST00000310301 DUX4L2P0CJ85 424 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DUX4L3P0CJ86 424 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DUX4L4P0CJ87 422 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DUX4L5P0CJ88 424 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DUX4L6P0CJ89 424 aa8.6□□□□□ -1.03
VPS41-202ENST00000310301 DUX4L7P0CJ90 424 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms