RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PLEKHO2Q8TD55 490 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 SLCO2A1Q92959 643 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 TRIM55Q9BYV6 548 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 EXOC7Q9UPT5 735 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 LRRC42Q9Y546 428 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 TP73O15350 636 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 KRT1P04264 644 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 ETS1P14921 441 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 PECAM1P16284 738 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-201ENST00000309017 TRAF1Q13077 416 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 CCNG2Q16589 344 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 XKR9Q5GH70 373 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 RFWD3Q6PCD5 774 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 ASAP3Q8TDY4 903 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 ZNF75CPQ92670 426 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-201ENST00000309017 FAM81BQ96LP2 452 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 GBP5Q96PP8 586 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 SENP1Q9P0U3 644 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 ANKFY1Q9P2R3 1169 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 HEY2Q9UBP5 337 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 PPP1R1BQ9UD71 204 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-201ENST00000309017 PCDHAC2Q9Y5I4 1007 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 CCDC22O60826 627 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 TCEA3O75764 348 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 GNAZP19086 355 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 ADRA1DP25100 572 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 DYNLT1P63172 113 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 ALCAMQ13740 583 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 MCOLN2Q8IZK6 566 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 IWS1Q96ST2 819 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 SYT15Q9BQS2 421 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 FHDC1Q9C0D6 1143 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-201ENST00000309017 DBNDD1Q9H9R9 158 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 NMRK1Q9NWW6 199 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 C2CD2Q9Y426 696 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 A6NHS1 94 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 TLR3O15455 904 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 CYP3A4P08684 503 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 TNNI1P19237 187 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 KCNA3P22001 575 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 TUBP50607 506 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 ARFIP2P53365 341 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 MYBPC2Q14324 1141 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 KHDC1Q4VXA5 237 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 ZCCHC9Q8N567 271 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 PYROXD1Q8WU10 500 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 MAML1Q92585 1016 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 SLC7A6OSQ96CW6 309 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 TRIM11Q96F44 468 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 IQCGQ9H095 443 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 C12orf65Q9H3J6 166 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 PSMC3IPQ9P2W1 217 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 PIK3CDO00329 1044 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 AHCYL1O43865 530 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 BANF1O75531 89 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 KRT36O76013 467 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 CPA2P48052 419 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 KPNB1Q14974 876 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 RNF220Q5VTB9 566 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 APOBEC3HQ6NTF7 200 aaKnown RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 PALM2Q8IXS6 379 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 TTC17Q96AE7 1141 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 ACSF2Q96CM8 615 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 FNBP1Q96RU3 617 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 DNPEPQ9ULA0 475 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 PCNTO95613 3336 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 ATAD5Q96QE3 1844 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 PPEF1O14829 653 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-201ENST00000309017 MAP3K7O43318 606 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 ATP9AO75110 1047 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 BAG2O95816 211 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 TMEM63BQ5T3F8 832 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 UCMAQ8WVF2 138 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 MKL1Q969V6 931 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 TMEM8AQ9HCN3 771 aa11.78□□□□□ -0.52
PTPN7-201ENST00000309017 HNRNPDLO14979 420 aaKnown RBP11.77□□□□□ -0.52
PTPN7-201ENST00000309017 ZWINTO95229 277 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 PHBP35232 272 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 CCNG1P51959 295 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 TAS2R40P59535 323 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 TCEAL1Q15170 157 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 ATP13A4Q4VNC1 1196 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 C6orf163Q5TEZ5 329 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 DCUN1D2Q6PH85 259 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 C10orf82Q8WW14 230 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 SCG3Q8WXD2 468 aaKnown RBP11.77□□□□□ -0.52
PTPN7-201ENST00000309017 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.52
PTPN7-201ENST00000309017 AGTPBP1Q9UPW5 1226 aa11.77□□□□□ -0.52
PTPN7-201ENST00000309017 SPATA31A5Q5VU36 1347 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 SPATA31A7Q8IWB4 1347 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 PROSCO94903 275 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 P4HBP07237 508 aaKnown RBP11.77□□□□□ -0.53
PTPN7-201ENST00000309017 ACADSP16219 412 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 MOGSQ13724 837 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 BBS9Q3SYG4 887 aa11.77□□□□□ -0.53
PTPN7-201ENST00000309017 SLC45A4Q5BKX6 768 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms