RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RALGAPA2Q2PPJ7 1873 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 A0A0U1RQF3 1178 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RCCD1A6NED2 376 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CYP26A1O43174 497 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KIF5CO60282 957 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RECQL4O94761 1208 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ATF7P17544 494 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CYP3A5P20815 502 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TNFAIP3P21580 790 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CCDC122Q5T0U0 273 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SCARA3Q6AZY7 606 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SPOPLQ6IQ16 392 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZNF677Q86XU0 584 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KIF18AQ8NI77 898 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 EPS8L1Q8TE68 723 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ATRIPQ8WXE1 791 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KIF12Q96FN5 646 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 LZTFL1Q9NQ48 299 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RGS18Q9NS28 235 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 DPP3Q9NY33 737 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PCDH10Q9P2E7 1040 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 C9IYK1 514 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 XPOTO43592 962 aaKnown RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GZMAP12544 262 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CYP11B1P15538 503 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RFC2P35250 354 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RAB27AP51159 221 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 YWHAEP62258 255 aaKnown RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 FAM189BP81408 668 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZNF699Q32M78 642 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZNF598Q86UK7 904 aaKnown RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RNF10Q8N5U6 811 aaKnown RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 BEST2Q8NFU1 509 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 LNX1Q8TBB1 728 aaPredicted RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 DDX1Q92499 740 aaKnown RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SEPT8Q92599 483 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 APBB2Q92870 758 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZMAT2Q96NC0 199 aaKnown RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 FTHL17Q9BXU8 183 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CXCL16Q9H2A7 254 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CYP3A43Q9HB55 503 aa13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 UBQLN1Q9UMX0 589 aaKnown RBP13.74□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SMIM28A0A1B0GU29 152 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ABL1P00519 1130 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CHRNB2P17787 502 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 USP8P40818 1118 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZNF132P52740 706 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GNG11P61952 73 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CDR2Q01850 454 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZNF667Q5HYK9 610 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 MFSD5Q6N075 450 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GPIHBP1Q8IV16 184 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GLYCTKQ8IVS8 523 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 LRRC52Q8N7C0 313 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ARID3AQ99856 593 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PRDM5Q9NQX1 630 aaPredicted RBP13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CEP290O15078 2479 aa13.73□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ANO9A1A5B4 782 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 MEIS3P2A8K0S8 358 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ITGB3P05106 788 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SKIP12755 728 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 P4HA1P13674 534 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 AKAP5P24588 427 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ASPAP45381 313 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SYT10Q6XYQ8 523 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SLC24A5Q71RS6 500 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SLC47A2Q86VL8 602 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TTC39CQ8N584 583 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ISCUQ9H1K1 167 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 AGAP1Q9UPQ3 857 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ENPP3O14638 875 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KRT19P08727 400 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 H2AFZP0C0S5 128 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KRT5P13647 590 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RAG1P15918 1043 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 POLR2BP30876 1174 aaKnown RBP13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PDE6CP51160 858 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 AGMOQ6ZNB7 445 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 H2AFVQ71UI9 128 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RPUSD2Q8IZ73 545 aaKnown RBP13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SLC20A1Q8WUM9 679 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ELMO3Q96BJ8 720 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 HPDLQ96IR7 371 aa13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 IRX2Q9BZI1 471 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PARP2Q9UGN5 583 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms