RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 BEST2Q8NFU1 509 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 MUC3BQ9H195 1237 aa14□□□□□ -0.17
TRIM56-201ENST00000306085 RHAGQ02094 409 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 UBE2SQ16763 222 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 ZNF189O75820 626 aaPredicted RBP13.99□□□□□ -0.17
TRIM56-201ENST00000306085 PDE9AO76083 593 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 CNTN1Q12860 1018 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 LONRF1Q17RB8 773 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 NUDT18Q6ZVK8 323 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 ABT1Q9ULW3 272 aaKnown RBP13.99□□□□□ -0.17
TRIM56-201ENST00000306085 PACSIN1Q9BY11 444 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 PHF20L1A8MW92 1017 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 S100A6P06703 90 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 ZCCHC18P0CG32 403 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 ATP6V1B2P21281 511 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 GRIK1P39086 918 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 AP3B2Q13367 1082 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 SLC25A13Q9UJS0 675 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 USP14P54578 494 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 ATP8B4Q8TF62 1192 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 MIEF2Q96C03 454 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 PPIEQ9UNP9 301 aaKnown RBP13.99□□□□□ -0.17
TRIM56-201ENST00000306085 CPA2P48052 419 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 HSD17B4P51659 736 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 CYP4A22Q5TCH4 519 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 NRDE2Q9H7Z3 1164 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 AATKQ6ZMQ8 1374 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 HPGDP15428 266 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 ALOX15P16050 662 aaPredicted RBP13.99□□□□□ -0.17
TRIM56-201ENST00000306085 MZF1P28698 734 aaPredicted RBP13.99□□□□□ -0.17
TRIM56-201ENST00000306085 GUCY1A2P33402 732 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 TAF5Q15542 800 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 IL31Q6EBC2 164 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRIM56-201ENST00000306085 CACNA1FO60840 1977 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 AGRPO00253 132 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 PHKA2P46019 1235 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 RBBP8NLQ8NC74 664 aaPredicted RBP13.99□□□□□ -0.17
TRIM56-201ENST00000306085 TMCC3Q9ULS5 477 aa13.99□□□□□ -0.17
TRIM56-201ENST00000306085 TARSP26639 723 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 ZCCHC17Q9NP64 241 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 TOPORSQ9NS56 1045 aaPredicted RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 NR3C1P04150 777 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 USP10Q14694 798 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PTRHD1Q6GMV3 140 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PGBD2Q6P3X8 592 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PIGSQ96S52 555 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 ZNF682O95780 498 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 FTLP02792 175 aaPredicted RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 S100A1P23297 94 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 BABAM1Q9NWV8 329 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 USP19O94966 1318 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 ADI1Q9BV57 179 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 CYP2D7A0A087X1C5 515 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 POU4F1Q01851 419 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 ESRP1Q6NXG1 681 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PID1Q7Z2X4 250 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PEG10Q86TG7 708 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 XPO7Q9UIA9 1087 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 CTNNAL1Q9UBT7 734 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 RALAP11233 206 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 TAB1Q15750 504 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 MTHFD1LQ6UB35 978 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 CCT8L2Q96SF2 557 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 DBR1Q9UK59 544 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 N6AMT1Q9Y5N5 214 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 FHOD1Q9Y613 1164 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 FAM47DPA6NHR8 397 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 LDHAP00338 332 aaKnown RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 ALOX12P18054 663 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 TBXAS1P24557 533 aaPredicted RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 IQCF2Q8IXL9 164 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 C4orf33Q8N1A6 199 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 B2RBV5 119 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 EIF3DO15371 548 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 SYTL1Q8IYJ3 562 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PSMC3IPQ9P2W1 217 aaPredicted RBP13.98□□□□□ -0.17
TRIM56-201ENST00000306085 SIK3Q9Y2K2 1263 aa13.98□□□□□ -0.17
TRIM56-201ENST00000306085 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 VHLP40337 213 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 LPIN1Q14693 890 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 PGS1Q32NB8 556 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 BTBD8Q5XKL5 378 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 PMF1Q6P1K2 205 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 TRIM48Q8IWZ4 208 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 ZNF473Q8WTR7 871 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 SMG5Q9UPR3 1016 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 CDY2AQ9Y6F7 541 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 CDY1Q9Y6F8 540 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 TNFRSF21O75509 655 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 TNFAIP2Q03169 654 aa13.97□□□□□ -0.17
TRIM56-201ENST00000306085 DCTN2Q13561 401 aaKnown RBP13.97□□□□□ -0.17
TRIM56-201ENST00000306085 KLHL3Q9UH77 587 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms