RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SWSAP1Q6NVH7 229 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 TTI2Q6NXR4 508 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 RNF135Q8IUD6 432 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 ATXN7L3BQ96GX2 97 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 PAWRQ96IZ0 340 aaKnown RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 RSAD1Q9HA92 442 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 OLA1Q9NTK5 396 aaKnown RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 NSMCE4AQ9NXX6 385 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 CNOT7Q9UIV1 285 aaKnown RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 M0R3G1 203 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 XPO1O14980 1071 aaKnown RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 ATP9BO43861 1147 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 KRT75O95678 551 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 KCNA2P16389 499 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 EFNA5P52803 228 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 ZNF543Q08ER8 600 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 LAMB3Q13751 1172 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 EZH2Q15910 746 aaKnown RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 SNRNP35Q16560 246 aaKnown RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 AASDHQ4L235 1098 aaPredicted RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 MEI1Q5TIA1 1274 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 EEPD1Q7L9B9 569 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 OR6P1Q8NGX9 317 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 PRPF18Q99633 342 aaKnown RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 PCDHA10Q9Y5I2 948 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 ABI1Q8IZP0 508 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 CLEC4FQ8N1N0 589 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 RBBP8NLQ8NC74 664 aaPredicted RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 DAGLBQ8NCG7 672 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 TSPAN17Q96FV3 270 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 MAML3Q96JK9 1138 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 AP5M1Q9H0R1 490 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 RUBCNLQ9H714 662 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 SENP2Q9HC62 589 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 EPB41L4AQ9HCS5 686 aaPredicted RBP11.56□□□□□ -0.56
PBRM1-201ENST00000296302 RHBDL2Q9NX52 303 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 FBXO40Q9UH90 709 aa11.56□□□□□ -0.56
PBRM1-201ENST00000296302 FKBP6O75344 327 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 ATP6V1B1P15313 513 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 NFKBIAP25963 317 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 SERPINB1P30740 379 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 YWHABP31946 246 aaKnown RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 BTKQ06187 659 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 KYAT1Q16773 422 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 SULF1Q8IWU6 871 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 SCUBE1Q8IWY4 988 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 CELF1Q92879 486 aaKnown RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 CLMNQ96JQ2 1002 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 MCEEQ96PE7 176 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 FAM217BQ9NTX9 383 aaPredicted RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 ZNF212Q9UDV6 495 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 INO80Q9ULG1 1556 aaPredicted RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 GLI1P08151 1106 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 AKR1B1P15121 316 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 MIGA2Q7L4E1 593 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 FRMD8P1Q9BZ68 369 aaPredicted RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 TMEM8AQ9HCN3 771 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 C15orf41Q9Y2V0 281 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 RALAP11233 206 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 COPB2P35606 906 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 KCNA1Q09470 495 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 PPHLN1Q8NEY8 458 aaKnown RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 AENQ8WTP8 325 aaKnown RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 MTMR4Q9NYA4 1195 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 OVOS2A0A0G2JMS6 1433 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 LOC100653049A0A140TA62 436 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 E5RI56 91 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 F8VZ95 297 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 KRT34O76011 436 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 PDGFRAP16234 1089 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 RPA1P27694 616 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 NUP107P57740 925 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 TBX2Q13207 712 aaPredicted RBP11.55□□□□□ -0.56
PBRM1-201ENST00000296302 LRRN4CLQ8ND94 238 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 PPP1R16BQ96T49 567 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 QRICH2Q9H0J4 1663 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 THAP2Q9H0W7 228 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 CAAP1Q9H8G2 361 aa11.55□□□□□ -0.56
PBRM1-201ENST00000296302 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 TRIM49D1C9J1S8 452 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 PSTPIP1O43586 416 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 RBP3P10745 1247 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 USP10Q14694 798 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 TTC33Q6PID6 262 aaPredicted RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 MSL3Q8N5Y2 521 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 FBXO25Q8TCJ0 367 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 PPP1R36Q96LQ0 422 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 TASP1Q9H6P5 420 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 HACD3Q9P035 362 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 CES2O00748 559 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 APBA3O96018 575 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 FDX1P10109 184 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 PMS1P54277 932 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 ZC3H12BQ5HYM0 836 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 ACBD5Q5T8D3 534 aaPredicted RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 YTHDF3Q7Z739 585 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms