RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 KLHL3Q9UH77 587 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 ZNF214Q9UL59 606 aaPredicted RBP7.33□□□□□ -1.24
VPS8-201ENST00000287546 TLDC2A0PJX2 215 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 RRN3P2A6NIE6 340 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 ADCY3O60266 1144 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 ACOT2P49753 483 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 ATF7IP2Q5U623 682 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 HGSNATQ68CP4 663 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 DSTYKQ6XUX3 929 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 IRF2BP2Q7Z5L9 587 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 WDR49Q8IV35 697 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 CCDC60Q8IWA6 550 aaPredicted RBP7.33□□□□□ -1.24
VPS8-201ENST00000287546 ANKS4BQ8N8V4 417 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
VPS8-201ENST00000287546 HAUS1Q96CS2 278 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 CDCA5Q96FF9 252 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 CAPS2Q9BXY5 557 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 GCOM2Q9BZD3 368 aaPredicted RBP7.33□□□□□ -1.24
VPS8-201ENST00000287546 TRIM7Q9C029 511 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 NIF3L1Q9GZT8 377 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 SNX25Q9H3E2 840 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 OLA1Q9NTK5 396 aaKnown RBP7.33□□□□□ -1.24
VPS8-201ENST00000287546 DONSONQ9NYP3 566 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 NXF1Q9UBU9 619 aaKnown RBP7.33□□□□□ -1.24
VPS8-201ENST00000287546 PACSIN2Q9UNF0 486 aaPredicted RBP7.33□□□□□ -1.24
VPS8-201ENST00000287546 TFR2Q9UP52 801 aa7.33□□□□□ -1.24
VPS8-201ENST00000287546 SPDYE5A6NIY4 337 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 MEI4A8MW99 385 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 DDX3XO00571 662 aaKnown RBP eCLIP7.32□□□□□ -1.247e-7■■■□□ 17.3
VPS8-201ENST00000287546 BUB1BO60566 1050 aaPredicted RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 ATP9AO75110 1047 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CAND2O75155 1236 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 NOL4O94818 638 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 KCNA2P16389 499 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 ADCY8P40145 1251 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CUL2Q13617 745 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CBWD6Q4V339 395 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CBWD3Q5JTY5 395 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CBWD5Q5RIA9 395 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 ABHD15Q6UXT9 468 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 PHLDB2Q86SQ0 1253 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 OOSP2Q86WS3 158 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CD302Q8IX05 232 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 TBC1D19Q8N5T2 526 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 P3H4Q92791 437 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 NTPCRQ9BSD7 190 aaKnown RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 KIFC3Q9BVG8 833 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 DDX56Q9NY93 547 aaKnown RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 INPP5FQ9Y2H2 1132 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 ALG6Q9Y672 507 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 NCANO14594 1321 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 TMEM247A6NEH6 219 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 RGS16O15492 202 aaPredicted RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 TJP3O95049 919 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 PYGLP06737 847 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CYP11B1P15538 503 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 UBA1P22314 1058 aaKnown RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 ATICP31939 592 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 RPS6KA2Q15349 733 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 SDCCAG8Q86SQ7 713 aaPredicted RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 RBBP8NLQ8NC74 664 aaPredicted RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 SCN9AQ15858 1988 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CCL15-CCL14A0A0B4J2E2 113 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 UNCXA6NJT0 531 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CD58P19256 250 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 DHX9Q08211 1270 aaKnown RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 CCL15Q16663 113 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 SMYD5Q6GMV2 418 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 MPZL3Q6UWV2 235 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 ANO5Q75V66 913 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CATSPER4Q7RTX7 472 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 PLPPR4Q7Z2D5 763 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CREG2Q8IUH2 290 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 VCPIP1Q96JH7 1222 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 PNKPQ96T60 521 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 C11orf70Q9BRQ4 267 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 ZNF518BQ9C0D4 1074 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 ISCUQ9H1K1 167 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CNOT10Q9H9A5 744 aaKnown RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 ADAM21Q9UKJ8 722 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 NDUFAB1O14561 156 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 PHF2O75151 1096 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CCNE2O96020 404 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 CLTAP09496 248 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 BEST2Q8NFU1 509 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 SELENOSQ9BQE4 189 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 DDX47Q9H0S4 455 aaKnown RBP7.32□□□□□ -1.24
VPS8-201ENST00000287546 NKIRAS1Q9NYS0 192 aa7.32□□□□□ -1.24
VPS8-201ENST00000287546 DHX15O43143 795 aaKnown RBP7.31□□□□□ -1.24
VPS8-201ENST00000287546 KRT1P04264 644 aa7.31□□□□□ -1.24
VPS8-201ENST00000287546 KRT7P08729 469 aa7.31□□□□□ -1.24
VPS8-201ENST00000287546 TNFRSF8P28908 595 aa7.31□□□□□ -1.24
VPS8-201ENST00000287546 ZSCAN26Q16670 478 aa7.31□□□□□ -1.24
VPS8-201ENST00000287546 DNAJC21Q5F1R6 531 aaKnown RBP7.31□□□□□ -1.24
VPS8-201ENST00000287546 EFCAB12Q6NXP0 572 aa7.31□□□□□ -1.24
VPS8-201ENST00000287546 LRIG3Q6UXM1 1119 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms